Crassostrea virginica (eastern oyster): 111125651
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Entry
111125651 CDS
T09197
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111125651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111125651
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
111125651
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
111125651
NCBI-ProteinID:
XP_022325369
UniProt:
A0A8B8DCH5
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Position
3:72858968..72883045
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AA seq
1300 aa
AA seq
DB search
MSSSEESEDDNWGLPAPSSGPRMERCLLGKTELLLPESMLEQSHIFRDVLSMDTWRNVLS
EEQRTHLKTMLPTFPSNDLAEKEDCLQKLFGNENFKFGNPLSQLQTKMREGFCSPDIAKY
ASICRNFKFREYKHRQQRYYSNLLKNILLSRQKAYNEVQRVPPGGQLQINHSAPARPKRS
SVEHRSKKKYVRLMKEVRQECGMEDTSSEEDDSTGSGQRSRKQLFKSSCPVPSPEPTIPS
VVHTFSPKPPLVNGDITGHGDGQQIKRQRPLSPVEVTEDDYKNLLRNHKKKKLLMSQEDH
PELNTDSITLQDIMLRCQATNKSSPKEIVSQSDTNSVAGKKKKMKLKEKSEKKMKKVLKI
KKEGSDYTSQSLIFSEEESLSPINLDIKEEPLPDIFQQDNALSKIPTSYSLYTNFFSLLR
DMVTEFEDGKATTAKMEEKVREWQESGSAAKNVWFTLIPNWVDCVLQSLKFLAGDLIDVS
PANFVPYVDYKERAQQWRWIGAGRDSDDNMAALFKHFITNRKEVNCDLFEGGTSSTPPPR
SKTGYVVKSTTEEEKAQFREQEGRRFTNPHKAFTYKMHNYESVVGPVKGVYTKDNSNNKA
REHALLVSNRPSFVTILTLVRDSAARLPNGEGTRGEICELLKDSQFLAPGVTDAQINVVV
SGALDRLHSEKDPCVKYDVNRKLWIYLHRSRSEEEFEKIHQAHGAAQKAKKSLQKPKTQK
SSKVKDANLSLSTSVSSPSLKSALSRDTLNVEEGVSLNPGSPSVAQSPRPNNSPSVNQVS
PRVLTNSSPRSTANQATIAALKNAVSAGTVPGSQGSVVHSQSAATIRLHLQQQQKAASVA
STPQKVTGKPASPTVTLGSPRVETPQGLPHSVQLGLLQSLRGASPNITQNLTSALRQELL
AQHQNSRSPTSSPTVSSPSVHKVTEKVTFVTTAASTVSSSPSAQLVTRLVQQVSGNQMVN
VGNLLTQRVQGPRGNVPTTLKIQGGNLLQPVGGGKPLQLAGKPLSQARGGHLVQITGKGA
QQLIQTPQGALPISIIPQGGGAHGVMTLGQSRTSSETGATGGPTIQTITRTSQGHPSTSS
QPKVVTPSQGGIVVTQLPPGLTIRPGSLPVSTQGKMVAGAQAGGQAGLLSQIIMQSSAVL
TGTSTSHAQSIAGGVPLLVSGTGGKPGQNIQVVRTVLGQQANLKPGQATILISQPTLQSN
ANVIHTGQLIQSSAKGKAGSGKAPPVYARIITPPPGQKPGAGTNSPQPSAAVSVLQTVNK
LISVANAAATSVSPASSSASKTSTDTTQTIAVDLPSEGPS
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcagtgaggagagtgaggatgataactgggggctacctgcaccttcctcaggt
ccccggatggagaggtgtctcctgggaaagacggaactcctactccccgaatctatgcta
gaacagagccacatcttcagggatgtgctgagtatggacacgtggagaaatgttttatca
gaggaacaaagaacacatctaaagacaatgttgccaacatttccttccaatgatttagca
gagaaagaagattgtcttcaaaaattatttggaaatgagaatttcaagtttggcaacccc
ctttcccagcttcagacaaaaatgagagagggcttttgttccccagacatagctaagtat
gccagcatatgtcggaactttaagtttcgggagtataaacacagacaacagaggtactac
tccaacctactgaagaacatcttattatccagacagaaagcatataatgaagtgcaaaga
gtgccacctggtggacagttacagattaaccacagtgctcctgccagaccaaaacgaagc
tctgtggagcatagatcaaagaagaaatatgtcaggttgatgaaggaggtcagacaggag
tgtgggatggaggatacatcttcagaggaggacgactctacaggatctggccagaggtcc
aggaagcagctgtttaaatcctcgtgtccagtcccctcccctgagcctaccattcccagt
gtagtccacaccttctctcccaaacccccgctagtcaatggggacatcacagggcatgga
gatggccagcagattaagaggcagcgtccattgagtccagtggaagtcactgaagatgac
tataagaacctattaagaaatcataagaaaaagaaactattgatgtcacaggaggaccac
cctgaactgaatacggattctatcacccttcaagacattatgttgagatgccaggccacc
aacaagagcagtcctaaggagattgtatctcagtcagacacaaactcagttgcgggtaag
aagaaaaaaatgaagttaaaggagaagtctgagaagaagatgaagaaggtgttgaagatt
aagaaggagggctcggactacacctcccagtccctcatcttcagcgaagaggaatctctg
tcccccataaacctggacatcaaagaggagcccctcccagatatattccagcaggataat
gctctttcaaagatccccacctcttacagcctgtacacaaacttcttcagtctgctacgg
gacatggtgactgaatttgaagatgggaaagcaaccactgcaaagatggaggagaaggtc
cgagaatggcaggaatcgggttctgctgctaagaatgtctggttcaccctgatcccgaac
tgggtggactgtgttctgcagtccctcaagtttctggcgggggacctcatcgatgtgtct
ccggcgaattttgtgccctatgtggactacaaggagcgagcccagcagtggcgatggata
ggggctgggcgtgactcggacgacaacatggccgcactatttaaacacttcatcaccaat
cgaaaagaagtcaactgtgatctgtttgaagggggaacaagttcaacccccccacccagg
agtaaaactggatatgttgtgaagtctacaactgaagaggaaaaagcacagttccgagaa
caagaaggccgtcgattcacaaacccccacaaagctttcacttacaagatgcataattac
gagtcggtggttgggccagtcaaaggagtgtataccaaagataactcgaacaacaaagct
cgagaacatgccctcctggtatccaaccgaccatcatttgtcaccattcttactctggta
agagactctgctgccaggctgcctaatggtgaaggcactcgaggggagatatgcgagctt
ctaaaagactcccaattcctagctcccggggtcactgatgctcagattaatgtggtagtc
agcggtgctttggacagactgcattctgagaaagatccttgtgtgaagtatgatgtcaat
cgcaagctctggatctatctacacaggagtaggtcagaggaagagtttgagaaaattcac
caggcccatggtgcagcacagaaagccaaaaagtcactgcagaaaccaaaaacacaaaaa
tcaagcaaagtaaaggatgccaatttgagcctgtctacctcagtgtcaagccccagtctt
aagtcggctctaagcagggacactctcaatgtggaagaaggggtgtcacttaatccagga
agtccttctgtggcacagagtcccaggccaaataacagtccctcagtgaatcaggttagt
ccccgggttctgaccaatagcagtccccgatccacggctaaccaggccacgatagcggcc
ctgaagaatgcggtcagtgcgggcaccgtccctggttctcagggtagcgtcgttcactcc
cagtcggcagccaccatccggctccatctgcagcaacagcagaaggcagcgtctgtggcc
agcaccccacagaaagtcaccggtaaacctgcatctcctacagtaactctaggatctcca
agagttgagactccacaaggactcccccattcagttcagttgggcctgcttcagagcctg
cggggggccagtcctaacatcacccaaaacctgaccagtgctctccgccaggagctgctg
gcccagcaccagaactctcgtagtcctacatcctcccccaccgtcagttctcccagtgtc
cacaaggtcacagagaaggtcacatttgttaccacggcagccagcactgtgtcctccagc
cctagtgctcagctggtcactcgcctggttcaacaggtgtcaggaaatcagatggtcaat
gtgggcaatctactgacacagagggtccaggggccacggggcaatgttcccaccactctg
aagatacaagggggtaacctgcttcagcctgtggggggagggaagccattacagttggct
ggaaaacccctttctcaggcccgaggaggtcacctggtgcagatcacagggaagggagcc
cagcagctgatacaaacaccccaaggtgccttacccatcagcattatcccacagggagga
ggggctcatggggtcatgaccctaggtcagtcaaggacatcttcagaaactggtgccact
ggaggtcctaccatacaaacaatcacccgcacatctcagggacatccctccacctcatct
caacccaaggtggtcaccccctcccaggggggcatcgtagtgacacagctaccccccggc
ctgaccatacgccctggcagcctccctgtatccactcagggtaagatggtggctggggcc
caagcaggggggcaagcgggactgctgtcacaaattatcatgcagtcctctgcagtcctc
accggaacaagcacttctcacgcacaaagtattgctgggggtgtaccattgctggtaagt
ggcactggtggaaaacccggtcagaacattcaagttgtaagaacagtactgggtcaacaa
gccaacctcaaacctggacaagccaccattctcatctctcaacccactctacaatcaaac
gctaatgtgattcatacaggacagttaatccagagctcagccaagggaaaggctggctcc
gggaaagcaccgcctgtttatgcaaggataattacccctccccccggtcagaagccgggg
gcggggaccaactcaccccagccctctgccgcggtcagtgtactacagactgtgaataaa
ttgatctccgtagcaaacgcagcagcaacatctgtctcccctgcctcctcctcggcttca
aagacatcgacggacacgacccaaacaatcgctgtagatctaccatccgagggcccctca
tga
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