Crassostrea virginica (eastern oyster): 111125671
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Entry
111125671 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family E member 1-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111125671
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
111125671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
Fer4_6
AAA_15
VapE-like_dom
AAA_16
RsgA_GTPase
AAA_29
Fer4_2
LdpA_Fe-S-bd
NACHT
Fer4_21
nSTAND3
TsaE
Fer4_10
SRP54
Fer4_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
111125671
NCBI-ProteinID:
XP_022325423
UniProt:
A0A8B8DBL5
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All DBs
Position
3
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AA seq
885 aa
AA seq
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MSPKFVAFVLSIGLFISNSQVDSLIVSNVDPVVGSIVDMTECLHTRRILYLWDFHIPVYA
HALQTVYEFIVAHLYTPARPCCLQGFVSDYTEAYQDLVFYLPNIRRMKERIQYRSPGCKL
YLAKSMEDSRVVRPIAYPRHHTTPKTTSTTTTTTTTTTTTPQPTTTTTPVMSTSTAGTGC
PTCDQNLNCVWKNVCSLTQSCLIRSYPGYPFTTHCAEKGDCLLMKQLASNGEIFCCTDEA
CIRKILGVXYLPGFRXEKRKSECDRSNLLQNSIYSKMSRRNDKSTAPADKLTRIAIVSND
KCKPKRCRQECKKSCPVVRMGKLCIEVTPADKIAFISEELCIGCGICSKKCPFEAISIIN
LPSNLEKDTTHRYSANSFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGRF
DDPPDWTEILTYFRGSELQNFFTKILEDDLKAIIKPQYVDQIPKAVKGSVQELLNKKDDL
GNQLDICEQLDLMAVRDRNVEDLSGGELQRFACAMVCIQKADIFMFDEPSSYLDVKQRLK
AALAIRGLIHADKFIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVTMPFSVREGINIFLD
GFVPTENLRFRETSLTFKVAETALEEEIKRMCRYEYPDMKKVMGNFELQIGQGQFTDSEI
IVMLGENGTGKTTFIRILAGKLQTDEGGPCPMLNVSYKPQKISPKAQGTXRQLLHERIRD
AYVHPQFVTDVMKPLMIENIIDQEVQNLSGGELQRVALALCLGKPADVYLIDEPSAYLDS
EQRLHAAKVIKRFVLHAKKTXFVVEHDFIMATYLADRVVVFEGTPSICTKANSPQSLLNG
MNSFLESLDITFRRDPNNFRPRINKLNSVKDTEQKKSGNYFFLED
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctaagttcgtcgcttttgtcttgtcgataggtttgtttatctccaactcgcag
gtggacagccttatagtatccaatgttgatcctgtagtcgggtcgatagtcgacatgacc
gagtgcttgcatacaagacgaattctctacttatgggattttcatatacccgtttatgca
catgcattacaaacagtatacgagttcattgtggcacatctgtatacccctgcaagaccc
tgttgtcttcaaggttttgtgagcgattatacagaagcataccaagatctggtgttttat
ttaccgaacattagaaggatgaaagagcgcattcagtaccgcagtcctggttgtaaactt
tacctagccaaatccatggaagattcaagagttgttcgacctatcgcatacccaagacac
cacacaactcctaaaacaacttcgacaaccaccaccacaacaacgacaacaacaacaacg
ccacaaccaacaacaaccacaacacctgtaatgtctacaagcactgcagggacaggttgt
cctacgtgtgaccagaatctgaactgcgtatggaaaaacgtgtgcagtctaacacagagc
tgcttgattcggtcttatccgggatatcctttcacgactcactgtgccgagaaaggagac
tgtttgctgatgaaacagcttgcatcaaatggagagattttttgctgtacagacgaggca
tgcattcgcaaaatcctaggagtgtgatatttacccggcttccggtaggaaaaaaggaag
tccgagtgtgacagaagcaacctgcttcaaaactccatttattcaaaaatgtccagaagg
aatgataaatccacagcaccagctgataaactaactcgtattgctatagtgagcaatgac
aaatgtaagcctaagagatgtcgacaggaatgtaaaaagtcatgtccagtggtcagaatg
ggaaaattatgcattgaagtaactccagcagacaaaatagctttcatctctgaggagcta
tgcattggatgtggaatctgttctaagaaatgtccctttgaagctatttccatcattaac
ttaccaagtaatttggagaaggacacaacccacagatacagtgccaattccttcaaactt
cacagattgccaattcctagacctggtgaagtgttgggtttggttggtacaaatggtatt
gggaaatccactgcactgaaaattttggcagggaagcagaaacctaatctgggacgattt
gatgacccccctgactggactgagatcttgacctacttcagaggatcagaattacaaaac
tttttcaccaagattcttgaagatgacctgaaggccatcatcaaaccccagtatgttgac
cagatccccaaggctgttaaaggatcagtgcaggaattactgaacaaaaaagatgacctt
ggcaatcagttggatatttgtgaacagcttgatctgatggcggtgcgggacagaaatgtg
gaggatctgtcgggaggggagctccagagattcgcctgtgccatggtctgcattcagaag
gctgacatcttcatgtttgatgagccgtcaagttacctggatgtcaagcagagactgaag
gctgccctggctatccgtggcttgattcatgcagacaaattcatcattgtagtggaacat
gatctgtctgtcctggactacctctcggatttcatttgctgtctctatggagttcccagt
gcctacggtgttgtgactatgcccttcagtgtcagagaaggaatcaacatatttttggat
ggctttgtgcccacagaaaatttgcgattcagagaaacatctttaacattcaaagttgct
gaaacagcattggaagaagaaatcaagagaatgtgcagatatgaatatccagacatgaaa
aaagtgatgggaaattttgaactccagattggacaaggccagtttacagactctgaaatt
attgtgatgttgggagaaaatggaactggaaaaaccacatttatcaggatattggctgga
aaattacaaactgatgaaggaggaccttgtccaatgctaaatgtcagctacaagccacag
aagatcagccccaaggcccagggcacgntgagacagctgctgcatgagaggatcagggat
gcctacgttcaccctcagtttgttacggacgtcatgaagccactcatgatcgaaaacatc
attgatcaggaggtgcagaatttgtctggaggagaattacaaagagtggcattggcattg
tgtctcggaaaaccagcggatgtgtatctgattgatgagccatctgcatatttagattcc
gaacagcgtttgcatgctgctaaagtcatcaaacggtttgtgttgcatgccaagaagacg
ncctttgtagtagagcacgatttcatcatggccacataccttgctgatcgtgttgttgtg
tttgagggaacaccctccatctgtaccaaggccaacagcccacagagcttgttgaatgga
atgaacagtttcctggaatctttggacataaccttcaggagagaccccaacaacttcaga
cctcgtattaacaaactcaactctgtcaaggatacagagcagaagaagagtgggaactac
tttttcttggaggactga
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