Crassostrea virginica (eastern oyster): 111125990
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Entry
111125990 CDS
T09197
Name
(RefSeq) 26S proteasome complex subunit SEM1-like
KO
K10881
26 proteasome complex subunit DSS1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03050
Proteasome
cvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
111125990
09124 Replication and repair
03440 Homologous recombination
111125990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111125990
04131 Membrane trafficking [BR:
cvn04131
]
111125990
03051 Proteasome [BR:
cvn03051
]
111125990
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111125990
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
111125990
Membrane trafficking [BR:
cvn04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
111125990
Proteasome [BR:
cvn03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
111125990
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111125990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSS1_SEM1
DUF2947
Motif
Other DBs
NCBI-GeneID:
111125990
NCBI-ProteinID:
XP_022326036
UniProt:
A0A8B8DGF7
LinkDB
All DBs
Position
1:33457345..33460502
Genome browser
AA seq
79 aa
AA seq
DB search
MSDGKEKEKKPDLGLLEEDDEFEEFPAEDWTGADEDEEDVNVWEDNWDDDNVEDDFSLQL
RAELEKQGKSMEGQEPMKT
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacggtaaagaaaaagaaaagaagcccgacttgggtttattagaggaagacgac
gaatttgaagaatttccagcagaggattggactggtgccgatgaggatgaagaggatgtg
aatgtttgggaagataactgggacgatgataatgtggaggacgatttctcattacaactc
agagcagaactagagaaacaaggaaaatcaatggaaggacaggaaccaatgaaaacttag
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