Crassostrea virginica (eastern oyster): 111125999
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Entry
111125999 CDS
T09197
Name
(RefSeq) protocadherin-9-like isoform X1
KO
K16498
protocadherin delta 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111125999
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111125999
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvn04515
]
111125999
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111125999
Cell adhesion molecules [BR:
cvn04515
]
Cadherins
Protocadherins
111125999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
Orf78
Motif
Other DBs
NCBI-GeneID:
111125999
NCBI-ProteinID:
XP_022326050
UniProt:
A0A8B8DD65
LinkDB
All DBs
Position
3:50374182..50392925
Genome browser
AA seq
1029 aa
AA seq
DB search
MAALVSVWLSLMTVMTVNSEIILNMTLREEEPVSTVVGNIASMSGLQNNMTPEAFQSLRY
SFLDQTKTDDLFRVDNEAGDLLTNAVIDREKQCGFNQECVFKFDVAAHSSFNSRFEIISV
RVTLLDINDHIPTFPYAIVNKSLSESAVIGSTIQLDEALDLDSTPQNGIQSYTMITTDSP
FLFSATKATEGVSLQLKLNSAINRENRDQYVLNILAVDGGSTPRTGTLTVKVEVTDENDN
APQFYQDVYDVSLREDREVGFQVIQLSASDKDIGQNGLVTYKFNPRQSFLTEINEYFNIN
ETNGKIVLKNKLTQSSTRKQYNITVDASDMGQPPKVSQCVVRVAIIDVENNKPLVRITLL
STGNTGAVSESSSVGTVIAHVTVEDSDSGSNGIVTCQIASNNFQLQSVLNKGYIVVIQQP
LNRELSDKYNLSVECSDQGAPPLSTVATIVVPISDENDNAPQFYKTLYQASIRENNAFGD
GITQVLARDQDIGQNAEIIYILPPESKDKLAINEETGVITANYRFDRENVSSYFFHVLAV
DKGNPALTGTATIQLTVVDENDNKPTFNVPMFQFFVMENMGPQLKVGSLSASDLDEGDNQ
KILFDFHSDFKNLPSSQMPFEIRPSGIISTKRDLDREDRNKYSFDIVAVDQGTPRLTSTC
RVVVYVADQNDNKPFITFPLFSNQTVKVSQQAKIGTIVTQIRAYDLDEIGPNSQLRYSII
GGNEKDVFSIGETSGNIYLKRTYEITENTPFKLRINVSDMNISHMQSSFQDLSIILTLPP
PIPQVLDEGGTKNIIITIAVVVLTIVLSAVIITVIIILRRNDQKILKTKNQDDVAKTMYS
TAPVGGCISPNLDKIPSDKVTSIVDSPRKKKGVSFTFDEESLQISHNDQMGQGQKEESFH
CKQNNVKDLKSLFLENIGRSSFKQQDNMSDSSGEITTSDSGRGGSDLDLSLHLSKSDERP
PRRGFKFKRNSDQDSRARASQYENINYVNTHYPQINNQREAIPPRPPRHNSDNEVQFHSE
DSQTNPSYV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctagtctctgtgtggctgtcactaatgactgtgatgactgttaacagtgaa
attattttgaatatgactttgagagaagaggagcctgtttctacagtagtaggaaacatt
gctagtatgagtggtttgcaaaataatatgacaccagaggctttccagagtctgcgctac
agcttcttggaccagaccaagacagacgatttgtttcgggtggataatgaagcgggtgat
ttgttaaccaatgcagtgattgacagggagaaacagtgcggatttaaccaggaatgtgtc
tttaagttcgatgttgctgctcattcctcttttaattcaaggtttgaaattatttcggtc
cgagtgactttgttggacatcaatgatcatattcctacttttccttacgccattgtcaac
aagagtttgtctgaatcagcagtgattggatcaacaatacaactggatgaagcactggat
ctcgattctactccacagaatggaattcagagctacaccatgataaccaccgattcccca
ttcctattcagtgcaaccaaagccactgagggtgtctctctacagttaaaactgaattca
gcaatcaaccgagaaaaccgagatcagtatgtgctgaacattttagcagtggatggtggc
tccacaccaaggaccgggacactgactgtcaaggtggaagtgacggatgaaaacgacaat
gctccacaattttatcaagatgtttatgatgtcagcttgagagaggatagagaggttgga
tttcaagtgattcagctttcagcatcggataaagatattggacaaaatggactagtgacc
tataagttcaatccccgtcaaagtttcttaacagaaatcaatgaatacttcaacataaat
gaaactaatggcaagatcgttttgaagaacaaacttacacagagcagcacaagaaaacag
tacaacattactgtggatgcaagtgacatgggacagcctccaaaagtatcccagtgtgtt
gtaagagtcgctattattgatgtagaaaacaacaaaccattggttcgtataactctactt
tctacgggtaacactggggctgtcagtgagtcgtccagtgtggggaccgtgattgcccat
gtaacagtggaagactcggactctggatccaatggaatcgtcacttgtcaaattgcctcc
aacaattttcaactccagtctgttctgaataagggttacattgtggtcatccaacaacct
ctgaatagggaactctctgataagtataacctctccgtggaatgcagtgaccaaggagct
ccaccattatccactgtggcaaccattgtggttcctatttcagatgaaaatgacaatgcc
ccccagttttataagactttgtatcaagcctctatcagagaaaacaatgcctttggagac
ggaatcacacaagttcttgcgagggatcaagacattggacagaatgcagaaataatatac
atacttcctcctgaatccaaagacaaattagccataaatgaagaaacaggtgttattacc
gctaattaccgatttgacagagaaaatgtgtcctcttattttttccacgttttggctgtt
gataaagggaaccctgccttgactggcactgctacaattcagcttacagtggtggatgaa
aacgacaataagcctaccttcaatgttcctatgtttcagttttttgtgatggaaaatatg
ggaccccaacttaaagtgggatctcttagtgcctcagatcttgatgaaggggacaaccaa
aagatactttttgactttcactctgatttcaaaaaccttcccagtagtcaaatgccattt
gagattcgtccatctggaattatttccacaaagagagacttggatagagaggataggaac
aagtactcctttgacattgtggccgtggaccagggcacccccagactgaccagcacctgt
agggtggtggtctatgtggcagaccaaaatgacaacaagcccttcatcacttttcctttg
ttttccaaccagactgtcaaagtatctcaacaagccaagattggaacaatagttactcag
attcgagcctatgatctggatgaaattggaccaaacagccaacttcggtattctattata
ggcggcaatgagaaagatgtcttctcaataggagaaacctccggcaacatctacctcaag
agaacatacgaaataacggaaaatactccattcaagctcaggattaatgtcagtgatatg
aacatatcacacatgcaatcttccttccaggatttgtcaatcattctgactcttcctcca
ccaattcctcaggtactggacgaaggaggcaccaagaatatcataataaccattgcggtt
gttgttctcaccatcgtattgtcagctgtcatcatcactgtcatcatcattctcagaaga
aacgatcagaaaatcctgaaaaccaaaaaccaggatgacgtagcaaagactatgtatagc
acggcccctgttggaggctgcatctccccaaacctggataaaatccccagcgacaaggtg
accagcattgtggactcaccccgcaagaaaaagggggtcagcttcacctttgatgaagaa
agccttcagatctctcataatgaccaaatgggtcagggccagaaagaagaaagtttccat
tgcaaacaaaataatgtcaaagacttgaagtctctattcttggaaaacattggaagatcc
agttttaagcagcaggataacatgagcgactcttcaggggagataactacgtcagacagt
ggtcggggtggcagtgacttggacctctctctacacttgtccaaatcagatgagaggcca
cctagaagaggtttcaagttcaaaaggaattctgatcaggactccagagcacgggcttct
caatacgaaaatataaactatgtgaatactcattacccacagattaataatcaaagggag
gcaatcccgccaagacctcctcggcataactcggacaacgaagtgcaatttcattcggag
gactcccagacgaacccgtcatatgtgtga
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