Crassostrea virginica (eastern oyster): 111126115
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Entry
111126115 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04140
Autophagy - animal
cvn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111126115
04148 Efferocytosis
111126115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111126115
Membrane trafficking [BR:
cvn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111126115
Hops complex
111126115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Phe_tRNA-synt_N
PIN_TASOR
Motif
Other DBs
NCBI-GeneID:
111126115
NCBI-ProteinID:
XP_022326237
UniProt:
A0A8B8DDP6
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Position
1:complement(61154857..61171305)
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AA seq
828 aa
AA seq
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MATADWNPLGEVYYKKCELYSMEWSETVDISKFEVSAAPYGGPIALLKDESKTARXQVST
KPIVTVFTAAGKQLGQMRWNSGNIHKMGWSHTEDLLFVQDDGVVLVYDMFLNFXKTFGMG
QEAKDVKVIDCKIFSSYQGTGIAVLTSTCRVFIINSVDDPRIRRLAEVPGLSSAPSSWAV
INLDRQSRALIAKGSELCLIDHGGQYQVQTPDLSTDVTEFLAMSLSFNNRCLAMFTDKGV
IWIGSSDLQKKYCEFNTKSPTPPQQLSWCGAGAVVGLWGNMMLVVGPDKDWINFNFDCPV
HLVEEEDGLRIIGKYQHEFLHKVPEVTEKIFKIGSMEPGAMLFEASKEFYKGSQKADEYI
RIIKDKLEVAVSQCIEAAGHEIDPAKQKPLLRAAAFGKCFLTDYSPEAYVNMCQMLRXLN
QVRHHVIGIPLTYSQLQHLSMPILIDRLVLRKLFYHAVKICQYLKIPDAEGASRILAHWA
CYKVQQKSENDETIARAINQKLGDTPGISYSEIANHALEEGRPDLATRLLDFEPQAGQQV
PLLMKMHKDSIALSKAIESGDTDLVYTVLLHXKGINEPGEFFMAIRNMPVAYALFIQYCR
QQNRTLMEDLFYQEDNFQEEGTCKVINSFGKERMEDRVEELKLAQSCFTKAKNEFARVQT
EDQIKLLKYQQRLEEEMNRPFLNLSLHETIYRLTIGNNHKVAEQLRKEFKVPDRRFWWLK
IXSLGESGDWLELEKFSKGKKXPVGMEAFVEVCSKHGNMKEALKYLXKVSPEQKVKCLVK
VGERKKAAETAFDNRSEXELNYVLSKCGPNDKQLVDSIRSMKQQLGKR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctacagctgactggaacccacttggtgaagtttattacaaaaaatgtgagctctat
tctatggaatggagtgaaactgtggacataagtaaatttgaggtttctgctgctccttat
ggtggcccaatagctctgcttaaagatgaatcaaaaacagctcggntacaagtgtccacc
aaaccgattgtcacagtgtttaccgctgctgggaaacaacttggacaaatgaggtggaac
agtggaaatatccacaagatgggttggtcacatactgaagacctgctgtttgttcaggat
gatggggtggtactggtgtatgacatgttcctcaacttcnaaaaaacttttggtatgggg
caggaagctaaagatgtgaaggtcatagactgtaagatattcagcagctaccagggaact
gggatagcagtcctaacaagcacctgtcgggtgttcatcatcaatagtgttgatgacccc
cgcatcagacgattggccgaggtgccaggtctgtcatctgcccccagtagctgggcagtg
ataaacttagaccgtcagtcccgagccttgattgccaaagggagcgaactctgtttgatt
gaccatggtggacaataccaagtgcagactcctgatctttccactgatgtcactgagttt
ctggccatgtccctctcattcaacaatcgctgcctcgccatgtttacagacaaaggcgtc
atctggattggctcctctgatcttcagaaaaagtattgtgaattcaataccaaatctccc
actcctccacaacagctttcatggtgtggtgcgggggcagttgttggactatgggggaac
atgatgctggtggttggccctgataaggattggataaacttcaactttgactgtcctgtt
catttggttgaagaggaagatggcttacgaatcatcggaaaatatcaacacgagtttcta
cataaagtcccagaggttacagagaagatatttaagattggctccatggagcctggggcc
atgttgtttgaagcttctaaagaattctacaaagggagccagaaggctgatgagtacatc
cgaatcattaaagacaaactggaggtggccgtcagtcagtgtatcgaggcagcaggtcat
gaaatagatccagctaaacagaagccattgctcagggcggcagcgtttggcaagtgtttc
ctgacagactacagccctgaggcatacgtcaacatgtgtcagatgctgaggntgctcaac
caagtcaggcaccatgtcatcggcattcctctcacctactcacaattgcagcatttgtcc
atgccaattctgattgatcgacttgtacttaggaagctattttatcatgctgtgaaaatc
tgccagtatttgaagatcccagatgcagaaggggctagcagaatattggcacactgggct
tgttataaggttcagcagaagtctgaaaatgatgagacgattgccagagccattaatcag
aagctgggagacactccagggatatcttactcggaaatcgcaaaccacgccttggaagaa
ggcagaccagacctagccaccaggctgttagattttgagccccaagctggccagcaggtg
cccctgttaatgaagatgcacaaggatagcatagccctgtctaaagccatagagagcggg
gacacagatctagtatacacagtcctgctacatnntaaaggaatcaatgaaccaggggaa
tttttcatggctattaggaacatgccagttgcatatgcattgtttattcagtattgtaga
caacaaaataggaccctgatggaagatctcttctaccaggaagataacttccaagaagag
ggaacttgtaaggtcatcaacagctttgggaaggagagaatggaggacagagtagaggaa
ctaaaactagctcagtcctgtttcacaaaagcaaaaaatgaatttgcaagggtgcaaacg
gaggatcagatcaagttactgaagtaccaacagcgactggaggaagagatgaaccgtccc
tttctcaatctgtcactccatgagacaatttaccgcctgacgataggaaacaaccacaag
gtggctgaacagctgaggaaggagttcaaggtgcctgacaggagattttggtggttgaag
atancaagccttggagagagtggtgattggttagaactggaaaaattctccaagggcaag
aagncccctgttggtatggaggcttttgttgaagtatgctcaaagcatggcaacatgaaa
gaagctctgaaatatctgnccaaggtatccccagagcagaaagtcaaatgcttagtgaaa
gttggagaaagaaaaaaagcagcagaaacagcctttgacaaccgtagtgaangagaattg
aactacgttttatcaaagtgtgggccaaatgataaacaattagtggacagcatacgaagc
atgaaacagcagctgggaaaaagatga
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