Crassostrea virginica (eastern oyster): 111126300
Help
Entry
111126300 CDS
T09197
Name
(RefSeq) intraflagellar transport protein 46 homolog isoform X1
KO
K19682
intraflagellar transport protein 46
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111126300
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
111126300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT46_B_C
Nop14
NOA36
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
111126300
NCBI-ProteinID:
XP_022326532
UniProt:
A0A8B8DEG9
LinkDB
All DBs
Position
3:49943697..49951695
Genome browser
AA seq
414 aa
AA seq
DB search
MESPDSEDERNKGILNVQNQPYDEALEIPDGEEVASEYSPTPRVHPGLSRQKRPPVPPAS
PTHSFDASELTAPRGQSRGDTPPETTMSDENDDEFEDNMNQMAPAQDTKPIQQSMAPKPV
PRQQQQFENDDDDDDDDSGSETDDDDEDDDDDDDDDDHVPVEGAYDPGDYENLPVTPEIK
ELFQYITRYTPQTIELDHSLLPFIPDLIPAVGDIDAFLKITRPDNRPDTLGLTVLDEPCA
KQSDPTVLDLQLRAISKQTTDKKMVVKSIDYAEKNPKQIESWIDSIKELHRTQPPPNVHY
SKNMPDIDTLMQEWPPEFEELLKEVGLPTAELDCDLPQYVDLICSILDIPVYKGSPHHNE
KIQALHVLFTLYSEFKNSQHFRALAQDNQMDNALKGGGVGAEGGPEDKEERLIL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcctgacagcgaagacgaaagaaataaaggaattttgaatgtacaaaatcaa
ccttacgacgaagcactagagattccagacggagaagaagttgcaagtgaatattcacct
acccctcgagtccatccaggactttctcgtcaaaaacgaccaccagtgcctccagcctcc
ccaacacacagttttgatgcatctgagctcacagcacctagaggtcaaagtagaggagac
accccacctgaaacaaccatgtctgatgaaaatgatgacgaatttgaggataatatgaat
caaatggctcctgcacaggacactaaacctatccaacagtctatggcccccaagcctgta
cccagacagcagcaacagtttgaaaatgatgatgatgacgatgatgacgactctgggtct
gaaactgatgatgatgatgaagatgatgatgatgacgacgatgatgatgatcatgtccca
gttgaaggagcttatgacccgggggactatgaaaatcttcctgtaacaccagaaataaaa
gaactatttcagtacatcacaagatacacccctcagacaattgaactagatcacagcctc
ctaccgtttatccccgaccttattcctgctgtaggagacattgatgccttcttgaagatc
acccgacctgacaaccgcccagatactctgggactgactgtactggacgaaccctgtgcc
aagcagtctgaccccacagtccttgacctccagctcagggcaatatccaaacagacaaca
gataaaaagatggtggtcaagagcattgattatgccgagaaaaacccgaagcagatagag
agttggatagacagcattaaagagctgcaccgcacacagcctcctcctaatgttcattat
tcaaaaaacatgccagatatagacactctaatgcaggaatggccaccagagtttgaagaa
ctactgaaagaggttggactccccacagcagaactggactgtgacctcccacaatatgtg
gatctgatttgctcgatacttgatatacctgtgtataaaggctctccacatcataatgaa
aagatccaggctcttcatgtcttgtttacactttattccgaatttaaaaattcacagcac
ttccgagcccttgctcaggacaaccagatggacaatgccctgaaagggggaggggttggg
gcagagggtggacccgaagacaaagaggagagactgatcttataa
DBGET
integrated database retrieval system
