Crassostrea virginica (eastern oyster): 111126498
Help
Entry
111126498 CDS
T09197
Name
(RefSeq) zinc finger matrin-type protein 2-like
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111126498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111126498
Spliceosome [BR:
cvn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111126498
Complex C
U4/U6.U5 tri-SnRNP related factors
111126498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
Cgr1
DUF6304
C2H2-zf_KIN17
SNRNP27
Calc_CGRP_IAPP
zf-C2H2
Herpes_gp350_A
Motif
Other DBs
NCBI-GeneID:
111126498
NCBI-ProteinID:
XP_022326893
UniProt:
A0A8B8DG43
LinkDB
All DBs
Position
3:29204038..29207472
Genome browser
AA seq
198 aa
AA seq
DB search
MAGAYEKNPGDHRRKWDKDEYERLAQERLEEEQRKQLEKELREPHQKRELLKPREYKVDL
DSKLGKSQVITKTTPASQQGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKIERSS
LDQVKKRFEINKKKMEEKKKEYDFEERLKELKEEEEKQKAYKKEKRKDRKRKAEPDDSEG
PSDMAAVMGFSGFGTSKK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggcatatgagaaaaatccaggggaccacaggcgcaagtgggataaagatgaa
tatgagcgtctagcacaagagagattagaagaggaacagagaaaacagctggagaaagag
ctcagagaaccacaccagaaaagggagctcctgaagccccgagagtacaaggttgattta
gattccaagcttggaaaatcacaagtcatcacaaaaacaactccagcttctcaacaggga
gggtattattgcaatgtctgtgattgtgttgtcaaagactcgatcaacttcctggatcac
atcaatggcaaaaaacatcagagaaatttgggaatgtccatgaaaattgaaagatcatct
ttagaccaagtaaagaagagatttgaaataaacaaaaagaaaatggaagagaagaagaag
gagtatgactttgaagagagattaaaggaattgaaagaagaggaagaaaaacagaaagct
tataagaaagagaaaaggaaagacagaaaacgcaaagctgagccagatgactctgaaggt
ccctcagacatggcagctgttatggggttctcaggttttgggacttccaaaaagtga
DBGET
integrated database retrieval system
