Crassostrea virginica (eastern oyster): 111126767
Help
Entry
111126767 CDS
T09197
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111126767
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvn02000
]
111126767
Transporters [BR:
cvn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111126767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111126767
NCBI-ProteinID:
XP_022327327
UniProt:
A0A8B8DGR1
LinkDB
All DBs
Position
3:27685460..27711236
Genome browser
AA seq
661 aa
AA seq
DB search
MVRQHVLEMVQFDSKMTKGETDSSKSRSSDDSIVMEKKQLKERDGWKGRLDFIMTCVGYA
VGLGNIWRFPYLCYKSGGGAFFIPYLFFLLLCGVPLFFMEASYGQFSSLSPISVWRMCPL
FKGVGVGMVMVSAIVCIYYNVIVAWTLYFLFMSFRAVLPWSTCDNEWNTENCVVGVEDTL
NNPTTNSSLLAILLNDTLGQSFNLSAFNGSLAALTNATAVITGKKMSASEEFWTRHVLEI
TEGINDPGTIRWQLLIGLMLAWVFVFLCLFKGVNVLGKVMHFAAPFPYLVLLVLLIRGVT
LPGAINGIKFYIVPKWEKLADYQVWGDAALQIFYSVGMAWGGIITMASYNKFSNNVYRDA
MLVPIINCATSIFAGFVIFAILGFMAHSANAPVDKVVSQGPGLTFVAYPEAVSKLPISPM
WAVLFFLMLFTIGLDSQFGMVETFISAVMDEFPHQLRTKRTLISFLVCLLEFVLGLPCIT
QGGIYVLQIMDWYCASFSLMLISLTECLAIAWIYGIDRFYKDLELMLGKRPHAIWGIMWR
FITPSIILGIWLFSVITLGPVTYDKKSYPTWAVVFGWCLGIASMLPIPILALRSLLTEEG
TLSQRWKKLTTPLESWGPSQPDDRERYLASLNKSRELVEISYSKRPQSNDDSGVATPFLS
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggtaagacaacacgtgcttgaaatggtccagtttgactcaaaaatgacgaaaggggag
acagattcttctaagagtcgttcatcggatgattctattgttatggagaaaaaacagttg
aaagaaagagatgggtggaaaggtcgattggattttattatgacctgtgtcggatatgca
gtaggactgggcaatatttggcggtttccttacttgtgttataaaagtggagggggagcg
ttcttcattccgtacttgttcttcctgttgctgtgtggagtgcctttgttctttatggag
gcatcctatggtcagttctccagccttagtccaatctcggtgtggaggatgtgtcccttg
ttcaaaggcgtgggagttggcatggtgatggtgtccgccatagtgtgtatttactataat
gtgatcgtggcttggacactgtacttcctcttcatgtctttccgagccgtgttgccatgg
agtacctgcgacaatgaatggaacacagaaaactgtgttgttggggtcgaggacacgtta
aacaatccaaccaccaattcctccctattggctattctattaaacgatacattgggacaa
tcgttcaacttgtctgccttcaatggctctcttgcagccttgacaaatgcaacagctgtt
ataactggcaaaaagatgtcggctagcgaagaattttggacgagacacgttctggaaatc
acggaaggaatcaacgatcctggaactatccgttggcagttactgataggcctaatgctg
gcctgggtctttgtcttcttgtgtctgttcaaaggggttaacgtgctaggaaaggtaatg
cattttgccgcacccttcccgtatctcgttctgttggtcctgcttatccgaggggtaacc
ctaccgggagcgatcaatggcatcaaattctacatcgtacctaagtgggagaagttggcc
gattaccaggtgtggggagatgcagctcttcagatattttattctgttggtatggcatgg
ggcggcatcattacaatggccagttacaataagttcagcaacaatgtgtacagggatgca
atgctggttcccattatcaactgcgccaccagtatctttgcaggatttgtgatctttgcc
attttgggttttatggcacattcagccaatgcaccagtggacaaagtagtcagtcaagga
cctggcctgacctttgtagcctacccagaagctgtctctaaactgccaatctcacccatg
tgggcggtgctgtttttcttgatgttgttcaccattggtctggacagtcagttcggtatg
gttgaaaccttcatatccgcggttatggatgagtttcctcatcagttaagaaccaagagg
acgctgatatcatttctggtctgcttattagagtttgttttgggacttccatgcatcaca
cagggaggaatctacgttcttcagatcatggattggtattgcgcaagtttttccttaatg
ctcatctcactgacagaatgtcttgctatcgcatggatttatggcatagatcgattttac
aaggaccttgaattgatgttgggaaagaggccccacgctatctggggaataatgtggcgg
ttcatcacaccctccattatattgggcatttggttattcagcgtgatcacattaggacca
gtaacgtatgataaaaagagttaccctacctgggctgtagtctttggttggtgtcttggt
attgcctctatgctacccatcccaatccttgcgttaagatccctgttaacggaggaggga
acactcagtcagaggtggaaaaaattgaccacacctcttgaaagctggggaccgagtcag
cctgatgatagggaaagatacctcgcctcgttaaacaaaagcagggaactcgtagagatc
tcttattcaaagcgcccgcagtcaaatgatgacagtggtgttgccacaccatttctctct
acgtga
DBGET
integrated database retrieval system
