Crassostrea virginica (eastern oyster): 111126771
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Entry
111126771 CDS
T09197
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111126771
03041 Spliceosome [BR:
cvn03041
]
111126771
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111126771
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111126771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
FUBP_C
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
111126771
NCBI-ProteinID:
XP_022327331
UniProt:
A0A8B8DK10
LinkDB
All DBs
Position
3:28553851..28565307
Genome browser
AA seq
698 aa
AA seq
DB search
MDAGEQGNSSHQAAFADAVARARQIAAKINQPGAGGGDGSQPLKRPFESDGNSYGEPDQK
KTVSAINDPIGAQLRALQDQQSRSDAAQAAQAAAARINQQLGVGPPSSAPPPSVPKPSSH
QGLGMVVTEEYAIPDKMVGLIIGKGGEQITRLQAETGCKIQIAPDGSGMPDRQCTLTGSS
GSIAACKQQIQDIIMRANQTGGPGMDGMGGMGGMGVGNGGGGGQTVVEIMVPGNKVGLVI
GKGGETIKQLQERGGVKMVMIQDSNIPSANEKPLRISGDPQKCQRAKEMVLDLLAEKEME
NMSKGFNDYGSYGGGGPPMEIPVPRTAVGIVIGKNGDMIKKIQQESGAKVQFKADDGSSP
ERVCAIAGSPDKVQIAAQMIQDLLNDYQQREGGMGRGFGGGRGRGGPGRGRGGFGGGPGR
GMGRGDGFGGFQDETQFAVPADKCGLVIGKGGETIRQINQQSGAHVELQKHPGPNPNEKL
FNIKGNPDQIQHAIQMISEKAGIPYGGPGGPGMGGPGGPGPHGGPVPGGPGGYGDQYGGQ
YGAPGQQQGGGQYGNGPQGGWGGYNQQQGYPQQQSGDPSQGGSDNKQAQDNAAAWAAYYA
QYYAQYGGYGGQYNQQQGQQQPQQPAQQSQAPQQQQPSSQQNYAEPCKSINPATGQADYS
AAWAEYYRQQGMHYQANMILQQAAAGQSGGAPQGQQPQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgggagaacagggtaattcgtcccaccaagcagcatttgcagacgccgttgcc
cgagcaagacagattgcagctaagattaatcaaccaggggctggcggtggtgacggatcc
cagccattgaaaagaccttttgaaagtgacggaaactcttacggtgaaccagaccaaaag
aagacagtgtctgcaattaatgaccctattggggcacagctaagagctctccaagaccaa
caaagccgaagcgacgctgcacaagcagcccaagcagcagctgccagaattaatcaacaa
ttaggtgtcggccctccatcgtcagcccctcctccatcagttcctaaacccagctcacac
caaggactaggcatggttgtcacagaggaatatgctatccctgacaagatggttggcctt
ataataggtaaaggcggtgaacaaataacacggctacaagctgaaacgggttgtaaaatt
cagattgccccagatggtagtggcatgccagaccgtcagtgcaccctcacaggttcctcg
ggctctattgctgcatgcaagcagcagattcaggacatcatcatgagagccaatcagacc
ggtggaccagggatggacggaatggggggtatgggtggaatgggagttggcaacggaggc
ggaggtggtcagacagtggtagagatcatggtcccaggcaacaaggtgggacttgtcatt
ggtaaaggaggagaaaccatcaaacagttacaggagagaggaggggtcaaaatggtgatg
atccaagatagcaacatcccttctgccaatgagaagcccctccggatctctggtgatccc
cagaaatgtcaacgtgctaaggagatggttctggatttgctggcggagaaggaaatggag
aatatgagtaaaggttttaatgactatggatcttatggtggaggtggtcctcctatggag
atcccagtgcctagaacagctgtgggaattgtcattggtaaaaatggagatatgatcaaa
aagattcaacaggagagtggagccaaagttcagtttaaggctgatgatggaagtagccca
gagagagtttgtgccattgctggatcaccagacaaagtacagattgctgctcagatgatt
caagatttgctgaatgattaccaacagagagaaggtggcatgggtcgtggatttggggga
ggcagaggtcggggtggtcctggcagaggtcgcgggggctttggagggggacccggtaga
ggcatgggacggggagatggcttcgggggattccaggatgaaactcaatttgctgtccca
gctgacaaatgtggattagtcattggaaaaggtggtgaaaccattcgtcagattaaccaa
cagtcgggagcacatgttgaactccagaaacatccagggccaaaccctaatgaaaagtta
ttcaacatcaaaggaaatcctgatcaaattcagcatgctattcagatgatcagtgagaaa
gcaggaataccctatggaggaccaggtgggccaggtatgggtggtcctggaggaccaggt
cctcatggtggccctgtccctgggggtccaggaggatacggggatcaatatggaggacag
tatggagcccctggtcagcagcaagggggaggtcagtatggtaatggtcctcaaggtgga
tggggaggatacaatcagcagcagggatacccccagcaacaatccggggaccccagtcag
ggtggttcggacaataagcaggcccaggacaatgctgcagcatgggcagcatactatgct
cagtattatgctcagtatggtggttatggagggcaatataatcagcagcagggacaacaa
caaccccagcaaccagctcagcagtctcaagctcctcagcaacaacaaccttcatcccaa
cagaactatgctgaaccctgtaagtctatcaacccagctaccggtcaagcagattacagt
gcagcttgggcagagtactaccgacagcaaggaatgcactaccaggcaaacatgattcta
cagcaggctgcagcagggcagtctggaggagccccacagggacaacaaccccagtaa
DBGET
integrated database retrieval system
