Crassostrea virginica (eastern oyster): 111126878
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Entry
111126878 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111126878
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111126878
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
Motif
Other DBs
NCBI-GeneID:
111126878
NCBI-ProteinID:
XP_022327496
UniProt:
A0A8B8DKI1
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Position
3:complement(63536839..63538936)
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AA seq
690 aa
AA seq
DB search
MFVLCVSFTQWSISISQCPKQFCTCTGKRVACVKHERHLRFIPSLPKHTEVLVFTGNFLP
IISQETFRNISGLRLRELSLGGNKIRNISSDAFEVLKSLIFLDLSGNQFPLSILQESFHG
LRHTKLKKLYLIEMALPDLPSDMXKHLQNVSTLHGISLNFNKLQNFVGSVFSVLKGLRYI
GLNNNSITNVDFRGSXRVRSNKLKQVPIFYDETGRPLAPSLRVLDLQDNHISEINKLQFR
GSCLHKLRNLTXDGNYFRTVPNNTFSDLPSLVRLSIKYLLSYKIVFETTCFNSSSLRLLY
IANHMDMFPDQPVSLTPSSDYKNIFRFCRGLNVLDMTRIRLTTNYGVKLYELLHHLTNLT
KLVLQSTSVLTLPEHLFSRMPFLAALHLDHCLLSQWRKGVFQNVSSIKTLYLDHNGIAII
NQTSFPPELLRSLKHLSLFSNPFLCTCDLVWFSQWIKNNSKVLLLWPYNYKCKSPKEWAG
KLLSEFSLSYSYCHPLSPYVIAAAATGAALALLFLVGGVLYRYRWHLKYYIYLLRAKKRG
YEALSGDDDFIYDVFVAYHSDDRVWVISELIPCLEKKEKLRLCLQDRDFEVGKLIVDNIT
EKIHGSRKVLLLLSNNFIQSQWCKFEMTMAHARSVEEDRTSSRVVVVLGNIDTQNMCNSL
HVLLKTTSFMXNEKSAKELFWKRLVASIKP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttttgtgtgtgtcttttactcagtggagtatttcaatctcacagtgcccaaaa
cagttctgtacgtgtactggaaagagagttgcctgtgtaaagcatgaacgacatctacgg
ttcatcccgtcgctacccaagcacacagaagtactcgtgtttaccggtaatttcttacca
ataataagtcaagaaaccttccgaaacatcagtggccttcgcctccgggaactgagtctg
ggagggaataagattcggaacatttccagtgacgcctttgaggtgttgaagtctttgatt
ttcttagacctcagcggtaatcaatttcctctttcaattctacaggagagttttcatgga
ctgcgccacaccaagttaaagaagctgtacctcattgagatggcgctaccagacctgccc
tccgatatgnttaaacatctacagaatgtttctacgctacatggcatatctttaaatttc
aacaaactacaaaacttcgttgggagtgtgttctctgtgctaaaagggttgagatatatt
gggctcaacaacaattctatcactaatgtagactttaggggctccnnaagggttcgatcg
aacaaactgaagcaggttccgatcttttatgatgaaacagggagacccttagctccatct
ttgcgagttcttgatctacaagacaaccatatttctgagataaacaaacttcaatttcgt
ggcagttgtctccacaaactccgaaatctgacgnctgacggtaactacttccggacggtt
ccaaacaacacgttttcggacctgccctccttagttcgtctctccatcaagtatctgttg
tcttacaaaattgtttttgaaaccacatgttttaacagttcctctttgcggctcctgtac
attgctaatcacatggacatgtttccagaccagcccgtgtctctaacgccatcttcagac
tataagaacattttccggttttgccggggactgaacgttctggatatgacacgcatcaga
ctaaccactaactatggggtcaagttgtatgaacttttacatcatttgaccaatttgacc
aaactggttctccaaagcacatcagtcctaactcttcctgaacacttgttttcaagaatg
ccttttcttgccgctttgcaccttgaccactgcttgctaagtcagtggaggaagggggtg
tttcagaatgtgtcatctatcaaaactctctatcttgaccacaatggaattgccatcatt
aaccagacttcttttccgccagaacttttgcgtagcctaaaacacttgtcattattttca
aacccattcctgtgtacatgtgatttggtctggtttagccagtggataaaaaataatagt
aaggttttattgctttggccctataattacaagtgtaaatcccctaaagagtgggccggg
aagctcctgtccgagttctccttgtcctactcctactgccaccccctgagtccctatgta
atcgctgcggccgccaccggcgctgctctggcgctcctgttccttgttggaggggtgctg
tatcggtaccgctggcacctcaagtactacatctacctcttgcgtgccaagaagcggggg
tatgaagcattgtctggtgacgatgattttatctatgacgttttcgtagcgtaccactct
gatgaccgtgtgtgggtcatctcagaattgattccttgcttagaaaagaaagagaaactg
cggctctgtcttcaagatcgggatttcgaagtgggcaaattgatcgtggacaatatcacc
gagaaaatccacggcagccgtaaggtgttgctgcttttatctaataacttcattcagagc
cagtggtgcaagttcgagatgacgatggcgcatgctcgcagtgtcgaggaggatcgcaca
agttcccgggtcgttgtggtccttggaaacatagacactcaaaacatgtgtaactccctg
cacgttctgctgaaaacgacgtctttcatgnngaatgaaaaaagcgctaaagaacttttt
tggaaaagacttgtggcttccatcaaaccctag
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