Crassostrea virginica (eastern oyster): 111127016
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Entry
111127016 CDS
T09197
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111127016
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111127016
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
Motif
Other DBs
NCBI-GeneID:
111127016
NCBI-ProteinID:
XP_022327704
UniProt:
A0A8B8DJD0
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Position
3:complement(63543027..63552116)
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AA seq
711 aa
AA seq
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MLLTSVMTPGRIFKVMFVLCVSFTQWSISISQCPKQFCTCTGKRVACVKHERHLRFIPSL
PKHTEVLVFTGNFLPIISQETFRNISGLRLRELSLGGNKIRNISSDAFEVLKSLIFLDLS
GNQFPVSILQESFHGLRHTKLKKLYLIEMALPDLPSDMFKHLQNVSTLHGISLNFNKLQN
FVGSVFSVLKGLRYIGLNNNSITNVDFRGSNVEVIRFRSNKLKQVPVFCDETGRPLAPSL
RVLDLGDNHISEINKLQFRGSCLPKLRNLTLDGNYFRTVPNNTFSDLPSLVRLSIKYLLS
YKIVFETTCFNSSSLRLLYIANHMDMFPDQPVSLTPSSDYKNIFRFCRGLNVLDMTRIRL
TTNDGVKLYELLRHLTNLTKLVLQSTSVLTLPEHLFSRMPFLAALHLDHCLLSQWRKGVF
QNVSSIKTLYLDHNGIAIINQTSFPPELLRSLKHLSLFANPFLCTCDLVWFSQWIKNNSK
VLFLWPYNYKCKSPKEWAGKLLSEFSLSYSYCHPLSPYVIAAAATGAALALLFLVGGVLY
RYRWHLKYYIYLMRAKKRGYEALSGDDDFIYDVFVAYHSDDRVWVISELIPCLEKKEKLR
LCLQDRDFEVGKLIVDNITEKIHGSRKVLLLLSNNFIQSQWCKFEMTMAHGRSVEEDRTS
SLVVVVLGNIDTQNMCNSLHVLLKTTSFMEWSNEKSAKELFWKRLVASIKP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttactgacatcagtaatgacacctggacgtatttttaaggtgatgtttgttttgtgt
gtgtcttttactcagtggagtatttcaatctcacagtgcccaaaacagttctgtacgtgt
actggaaagagagttgcctgtgtaaagcatgaacgacatctacggttcatcccgtcgcta
cccaagcacacagaagtactcgtgtttaccggtaatttcttaccaataataagtcaagaa
accttccgaaatatcagtggccttcgcctccgggaactgagtctgggagggaataagatt
cggaacatttccagtgacgcctttgaggtgttgaagtctttgattttcttagacctcagc
ggtaatcaatttcctgtttcaattctacaggagagttttcatggactgcgccacaccaag
ttaaagaagctgtacctcattgagatggcgctaccagacctgccctccgatatgtttaaa
catctacagaatgtttctacgctacatggcatatctttaaatttcaacaaactacaaaac
ttcgttgggagtgtgttctctgtgctaaaagggttgagatatattgggctcaacaacaat
tctatcactaatgtagactttaggggctccaatgttgaagtgatccggtttcgatcgaac
aaactgaagcaagttccggtcttttgtgacgaaacagggagacccttagctccatctttg
cgagttcttgatctaggtgacaaccatatttctgagataaacaaacttcaatttcgtggc
agttgtctccccaaactccgaaatctgacgctggacggtaactatttccggacggttccg
aacaacacgttttcggacctgccctccctagttcgtctctccatcaagtatctgctgtct
tacaaaattgtttttgaaaccacatgttttaacagttcctctttgcggctcctgtacatt
gctaatcacatggacatgtttccagaccagcccgtgtctctaacgccatcttcggattat
aagaacattttccggttttgccggggactgaacgttctggatatgacacgcatcagacta
accactaacgacggggtcaagttgtatgaacttttgcgtcatttgaccaatttgaccaaa
ctggttctgcaaagcacatcagtcctaactcttccagaacacttgttttcaagaatgcct
tttcttgccgctttacaccttgaccactgcttgctgagtcagtggaggaagggggtgttt
cagaatgtgtcatctatcaaaactctctatcttgaccacaatggaattgccatcattaac
cagacttcttttccgccagaacttttgcgtagcctaaaacacttgtcattatttgcaaac
ccattcctgtgtacgtgtgatttggtctggtttagccagtggataaaaaataacagtaag
gttttatttctttggccctataattacaagtgtaaatcccctaaagagtgggccgggaag
ctcctgtccgagttctccttgtcctactcctactgccaccccctgagtccctatgtaatc
gctgcggccgccaccggcgctgctctggcgctcctgttccttgttggaggggtgctgtat
cggtaccgctggcacctcaagtactacatctacctcatgcgtgccaagaagcgggggtat
gaagcattgtctggtgacgatgattttatctatgacgttttcgtagcgtaccactctgat
gaccgtgtgtgggtcatctcagaattgattccttgcttagaaaagaaagagaaactgcgg
ctctgtcttcaagatcgggatttcgaagtgggcaaattgatcgtggacaatatcaccgag
aaaatccacggcagccgtaaggtgttgctgcttttatctaataacttcattcagagccag
tggtgcaagttcgagatgacgatggcgcatggtcgcagtgtcgaggaggatcgcacaagt
tccctggtcgttgtggtccttggaaacatagacactcaaaacatgtgcaactccctgcac
gttctgctgaaaacgacgtctttcatggaatggtcaaatgaaaaaagcgctaaagaactt
ttttggaaaagacttgtggcttccatcaaaccctag
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