Crassostrea virginica (eastern oyster): 111127122
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Entry
111127122 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 3-like
KO
K09364
POU domain transcription factor, class 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111127122
03021 Transcription machinery [BR:
cvn03021
]
111127122
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111127122
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
111127122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111127122
NCBI-ProteinID:
XP_022327863
UniProt:
A0A8B8DJ51
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Position
3:complement(13715178..13727316)
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AA seq
588 aa
AA seq
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MRRKLFSIKMNSETVSDSVTVTNNGQSESKAASGLTNATTLQQQLQSALLAQQFPLATAG
AQTGFFIQNPYGQSAVIPVSAALPTASIQIADLQQLQQLTQQLTQQQQQLQLQQIQQQVT
NSPVVSSSASTTSVVTQQAPISTATPQPTQIQNTPLATTTLQGLAGALRGXQIVFLNPAQ
LTTGLQPLLIQNQGIPVLTAATLASLTQQVQQQQQQQTQQQPNTAAVLQQLQQLQNASTQ
PLQIQVSAAQPITIPQSGTPVKVQNTMTKISTPSQIVLPNVSTASVTIKSPPDELSSSGV
VDEIPPEENIDLEELEQFAKTFKRRRIELGFTQGDVGLAMGKLYGNDFSQTTISRFEALN
LSFKNMCKLKPLLQKWLKDADTMCANLNTPVGGSPGGNGNSLSPESVARRRKKRTSIETN
IRVALEKSFQQNPKPSSEEITAVADSLNMEKEVVRVWFCNRRQKQKRINPPSNYNHQLSS
PLSPPITPVQVVASPTNQLTAPSSQATMTLPTIISSSTGAALVAGSTPSSLPGTNQNFIM
AKLGPVSTSGNNQVILTQALPTTVSTAQGISLQQTKQIIPQKIEFTTA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaggaaattattcagcatcaagatgaatagtgagactgtctcagactcagtgaca
gtaaccaacaacgggcagtccgagtccaaggcggccagtggactgacaaatgcaacaacc
ttacaacagcagctgcagtcagcgttgcttgcacagcagtttcccctggcaacagctggt
gcacagactggtttcttcattcagaatccatatggacaatctgcagtgatccctgtatct
gctgcactacccactgctagcatacagatagcagatctacagcaactgcagcaactcaca
cagcaactaacacaacagcaacagcaactccaactacaacagattcaacagcaggtgacc
aacagcccagttgtcagctcgtccgctagcaccacctcagtggtcacccagcaggctccc
atcagcaccgccaccccccagcccactcagatccagaacacgcccctggctaccactacc
ctgcaggggctggccggggccctcaggggcnagcagattgtgttcctgaaccctgctcag
ctgaccacgggactgcaacctcttctgatccaaaaccagggaattcctgttttgactgct
gccaccttagcatcattgacacaacaagttcagcagcagcagcaacaacaaactcagcaa
caacctaatactgctgctgtcttacaacaactccagcaactccaaaatgcctcaacgcaa
ccccttcagattcaggtttctgctgcacagcctattaccattccacagagtgggactcca
gttaaagtccagaacacgatgaccaagatctctaccccctcccagatcgttctcccgaac
gtgtcgactgccagcgtcaccatcaagtctccccccgacgaattgtcctcatcaggggtt
gtggacgagattcctcccgaagaaaacattgacttggaggaactagaacagtttgcaaaa
acattcaagagacggagaatagaattaggtttcacacaaggggatgtaggattagcaatg
ggaaaactgtacggcaatgatttcagccaaaccacaatatcaaggtttgaagctctgaat
ctgagttttaagaatatgtgcaagctgaaacctttgctacagaaatggctgaaggatgcc
gacacaatgtgtgcgaatctcaacactccggttggaggtagtccgggcggaaacggaaac
agcttgtcacccgagtccgtggcgcggcggcggaaaaagagaacaagtatagagacaaat
atccgtgtggctctggagaagagtttccagcaaaaccccaaaccttcctctgaggaaatc
actgctgttgctgacagtctgaacatggagaaggaagtagtgcgcgtctggttctgtaac
cgccggcagaaacagaagaggattaacccgccctcaaactataaccaccaactgtcttcc
cccctctctcctcccataacccccgtacaagtggtggcctcccccacaaatcagctgacc
gccccctcatcacaggccaccatgacactacccacaatcatcagttcatccacgggcgcc
gccctggtggcgggatccaccccctcctctctgccagggaccaatcagaacttcatcatg
gccaaattaggccctgtgtctacctccggcaacaaccaggtcattctgactcaggcatta
ccaaccactgtgtccacagcccaaggcatttctctccaacaaaccaaacaaattattcca
cagaaaatagaattcaccacagcatag
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