Crassostrea virginica (eastern oyster): 111127274
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Entry
111127274 CDS
T09197
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111127274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111127274
03036 Chromosome and associated proteins [BR:
cvn03036
]
111127274
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
111127274
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
111127274
RSF complex
111127274
WICH complex
111127274
B-WICH complex
111127274
NORC complex
111127274
BRF complex
111127274
NuRF complex (fruit fly)
111127274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
111127274
NCBI-ProteinID:
XP_022328085
UniProt:
A0A8B8DK37
LinkDB
All DBs
Position
3:complement(73460581..73488585)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSESEESGSEEPMETKPIVGPSVLLKSPPKGKNDDNDDTREEFDAKIEADRGNRFEFLLK
QTELFAHFMQTGGGNTGSGKTPTSPLKMKPGRPSKGKKLDEKAKLVSAGDHRHRRTEQEE
DEELLSESKKTNTSASFRFESSPSYIKAGEMRDYQVRGLNWMISLYENGINGILADEMGL
GKTLQTISLLGYMKHYKHIPSPHLVICPKSTLANWQAEFKRWCPSLRAVCLIGNQDQRTA
FIRDVMMPGEWDVCITSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKS
TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFNTNNCIGDSALVERLHEVLR
PFLLRRLKSDVEKALLPKKEIKIFVGLSKMQREWYTKILMKDIDVVNGAGKSDKMRLLNI
LMQLRKCANHPYLFDGAEPGPPYTTDKHLYENSGKMAILDKLLPKLQAQDSRVLIFSQMT
RMLDILEDYCHWRGYDYCRLDGQTPHEDRTRYINEYNMPNSKKFIFMLSTRSGGLGINLA
TADIVIIYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFITENTVEERIVEKAEMKLRLDN
VVIQQGRLVDPSANKLGKDEVLNMIRHGASHVFASKDSEITEEDIDDIIEKGEKKTEEIK
AKYDNLGEGSLRSFTMDTGGEGGSVYQFEGQDYRDKHKGVGHWIEPPKRERKANYAVDAY
FREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLDKEIYFFRKSIGYRVPKNPDLG
ADAERVRKEEQGKIDESEVLTEEELAEKEDLLKEGFTNWSKRDFNQFIKANEKYGRDDLD
SIARDVEGKTPEEVMEYSGVFWERCNELTDIEKIMAQIERGEAKIQRRISIKKALDAKMA
RYRAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRTSVRQAPQFRFD
WFIKSRTAMELQRRCNTLITLIERENMELEEKEKAEKRRRGKSGTPKGQKRKADAMDNRG
RPKKKK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatctgaggagagcggctcagaagagccaatggaaaccaagcccattgttgga
ccatctgtgcttctgaagtctccacccaaaggcaaaaatgatgacaacgatgacacgagg
gaggagtttgatgctaagattgaggctgacaggggcaacagatttgagttcttactcaag
caaacggagttgtttgcacatttcatgcagactgggggtggaaacactgggagtgggaaa
actccaaccagtcccctgaaaatgaagccggggcgaccaagcaagggcaaaaaattggat
gaaaaagccaagcttgtatcagctggagatcacagacatagacgaacggagcaggaagag
gatgaggagttgctatccgaatctaaaaagaccaacacgtctgcatcattcagatttgaa
tctagcccttcatatatcaaggctggagaaatgagagattaccaggttcgtggtctgaat
tggatgatctctctatatgagaatggaattaatggcattcttgctgatgaaatggggttg
ggaaagactctgcagacaatctccttgcttgggtacatgaagcattacaaacacattcct
tcacctcatctggtcatctgtcccaaatccacactggccaattggcaagcagagttcaaa
cgctggtgtccctcgcttcgggctgtctgtcttatcggaaatcaagatcagaggacggcc
ttcatcagggatgttatgatgcccggagaatgggatgtgtgcattacctcttacgaaatg
tgtatccgtgaaaagtcagtgtttaagaaatttaactggagatatcttgtgattgacgaa
gcacacagaatcaagaatgagaaatcaaagttgtcagaaattgtgagagaatttaaatca
acaaatcggttgcttttgactggaaccccacttcaaaacaatcttcatgagttatgggcc
ctgttgaatttcctcctgcctgatgtttttaactcctcagaggattttgactcttggttt
aacacgaacaattgcataggtgattcagcactcgtagaaagacttcatgaagtactaagg
cctttcctcctaagacgtcttaaatcagatgtagaaaaagccctgctaccgaaaaaggaa
atcaagatctttgtaggtctcagtaaaatgcagagggaatggtataccaaaattctgatg
aaagatattgatgttgtgaatggagctgggaaatcagacaaaatgagactgctgaatatt
ctgatgcagctgaggaaatgtgccaaccacccctatctctttgatggtgctgaaccaggt
ccaccatacacgactgacaaacatttgtatgagaacagtgggaagatggccattctggac
aaacttttgccaaagctgcaagcacaggattctcgagtcctgatcttcagtcagatgacc
agaatgttggacatattggaggattactgtcactggaggggctatgactactgccgattg
gacggacagacaccccatgaggacagaactagatacatcaatgaatacaacatgccaaac
agcaagaaattcattttcatgttgagtacaagatcggggggtctaggaatcaatttggcc
acggcagacattgtgattatctacgactcggattggaacccccaagtggatctacaggct
atggatcgagctcatcggattggtcagaagaaacaggtgaaggtgttccgcttcatcacg
gagaacacggttgaggagaggatcgtggagaaagccgagatgaagctacgtctggataac
gtcgtcatccagcagggtcgcttggtggatccaagtgcaaacaagctcggcaaagatgaa
gttctgaacatgatccggcacggtgccagtcatgtgtttgcttccaaagacagcgagata
acagaggaagacattgatgacatcattgaaaaaggagagaagaagacagaagagataaaa
gccaagtacgacaatctgggtgagggttccctccggtccttcaccatggacacgggtggg
gaggggggcagcgtgtatcagtttgagggacaggactaccgggacaaacacaaaggagtg
gggcactggatcgagccgcccaagagggagaggaaggctaactatgctgtggacgcgtac
ttcagagaggccctgcgagtcagtgagcctaaagcacccaaggcaccacgaccacctaaa
caacccaatgttcaagatttccaattctttcctccacgattgtttgaattactggacaaa
gaaatctacttcttcagaaagtccattggctacagggtacctaaaaatcctgacctggga
gctgatgctgagagagtgagaaaggaagaacagggcaagatagacgagtcggaggtgttg
acagaggaggagctggccgagaaggaggacctcctgaaagagggttttacaaactggagc
aagagagatttcaatcagtttatcaaggcgaatgagaagtatggccgtgatgacttggac
agtatagcgcgtgacgtggaggggaagaccccagaggaagtgatggagtactcaggtgtg
ttctgggagaggtgtaacgagctcactgacatcgagaaaatcatggctcagatcgaacga
ggagaggccaagatccagcgccgaatcagcatcaagaaagctctagacgccaagatggca
cgataccgagcgccgttccatcagctgaggattcagtacgggacaaacaaaggcaagaac
tacacagaggaggaggacaggttccttatctgcatgctgcacaagctgggcttcgacaag
gaaaatgtctacgatgaactgcgcacatctgtacgccaagcgccacaattccgattcgac
tggttcatcaagtccagaacagccatggagttgcagaggaggtgtaatactttaattact
ctgatagaaagagaaaatatggaactagaggaaaaagaaaaggcagagaaaagacgaaga
ggcaaatcgggtactcccaaagggcagaaacggaaggcggacgcaatggacaataggggg
cgccccaaaaagaaaaaatga
DBGET
integrated database retrieval system
