Crassostrea virginica (eastern oyster): 111127314
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Entry
111127314 CDS
T09197
Name
(RefSeq) integrator complex subunit 5-like
KO
K13142
integrator complex subunit 5
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111127314
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
111127314
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
INTS5_C
INTS5_N
Motif
Other DBs
NCBI-GeneID:
111127314
NCBI-ProteinID:
XP_022328137
UniProt:
A0A8B8DJ20
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Position
3:complement(66848949..66859157)
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AA seq
939 aa
AA seq
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MAATAGSNTKDILSEVRTFIAGTSKEKSISAENLARSALHLLQTLPVARHAVLEHLCSLF
DEAVKLHILQSDDPAYQEQGESKLDVVIQDVCGVLFNFIKTNPMAWAPIISNWSLELLGH
ISCKYAHQCGLSPTSSLNELLQMWVTCKPTKALMEVATECFAAMVSSAPDVCVDALLEAS
VKYSPHFDWVVAHIGSCFPNTIITRVLMCGLKDFCQHGNKRPDMEVRGDEKVPKMNSVVD
ILGHLASKHRQDIRGALMKLFEESMKSDSEVVKVTTVPFLLELASRSDMLLQVLSTDLIK
SLNPKLLDKLHANFEPWRKRNAPEYMSLISLVVQLIMKIDFTTLEVLEFMLEIASPVNTQ
CSPCSEVQEVGAIILNRLIFELQRSVFHKHRDSSYDVPFLSSLVDQSTQILRQLLESKGP
RGDWLLRIAAYIGLYSGEDLASDMMVYIICNATSHVQLCRFVQLQSIVEVKLGDVLPVVV
QKVTDKLRSYKIPQPNIILGNILAILEWEKSTKSLSERSTTLYWMKKQWEAFLPLLTNDD
LHLVLKTVNVLNALEIPTNISSATALRLCSTLLNFFFRSLEVEDTRTCSSMFHSCRLCLK
YLCKETFIQCIALRFLMESLFIKDIAILFGAKQNVPVSKDEKEKKNFQSLYESNRKQGLT
TTLHRTQSTVFHAGVIGQGLRLSKSGPILPKVHVERNKQCLMSILRCCSHQTKHTEELKS
PTAESAMETDEVTATPPHRLNVSGDLCRMIGSLMTELITPDVLYNNRFWPEEESIQMTVE
RDLQIFKNMDDNPVLWQILDMYAASPLTMCRCSPILKSLTASLMIHFESSREKSARNTPK
QLEAAAHLITYLGKSRLLPAPLRYVSELFHMATSFEVYLLLLSVWRYMKEFPPTEDPDEV
NTRACELRHLETIRSIMHNNVDRMGNFYGRFFSQFSTSD
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcaggttccaatacaaaagacattttgtctgaagtacggacgtttatt
gctggtaccagtaaagagaagtccatcagtgcggagaacttggccagatctgctctacat
ttgctgcagaccctgcctgtggctagacatgctgtactggaacacctgtgttctctgttt
gatgaggctgtcaaacttcacattctccaaagcgatgatcctgcttatcaagaacaagga
gaatcaaagttagatgttgtcatccaagatgtctgtggtgtcctctttaatttcatcaag
acaaacccaatggcctgggcaccaatcatctctaattggtctcttgagttactaggacac
atcagctgtaaatatgctcatcagtgtggattgtccccaacttcctctctgaacgaactc
cttcagatgtgggtcacctgtaaacccactaaggccttgatggaggttgccactgaatgc
tttgctgctatggttagcagtgcccctgatgtatgtgtagatgcattattagaagcctct
gtcaaatacagtccacattttgattgggtggttgcacatattgggtcctgttttccaaat
actataataactagagtactgatgtgtggccttaaagacttttgtcagcatgggaacaaa
cgacctgatatggaagtgagaggagatgaaaaagttcctaaaatgaattcagtggttgac
attcttggtcatctggcatctaaacaccgacaggatataaggggagctctcatgaagctg
tttgaggagagcatgaagtcggacagtgaggtggtgaaggtgaccactgtccccttcctg
ttggagctggcctccagatcagacatgcttctgcaggtcctcagcaccgatctcatcaaa
tctctgaatcccaagttgttagataagctacatgcaaactttgaaccatggagaaaaagg
aatgcgccagaatatatgagtttgataagccttgtggtacagctgataatgaagattgac
ttcacaactctggaagttctggaattcatgttggagatagcctcaccagtgaacacacag
tgcagcccttgttctgaggtccaagaagtgggagccatcatacttaaccggctgattttt
gagctgcagagatccgtcttccacaaacaccgggactcttcctatgatgtgccgttcctg
tcctccctggtggatcagtccacacagatcctgagacagctgctggagagtaaaggcccc
agaggggactggttgttgaggatagcagcatacattggactgtacagtggagaagaccta
gccagtgatatgatggtgtacatcatctgtaatgctacatctcatgtgcagctatgtcgc
tttgttcagctgcaaagcattgtggaggttaagctaggagatgtgctgcctgttgttgtg
cagaaagtgacagacaaattgaggtcgtacaaaatccctcaaccaaacatcatactgggg
aacatattagccattctggaatgggagaagtccaccaagtccctcagtgagagatctaca
acattatactggatgaaaaaacagtgggaagcatttttacctcttttgaccaatgatgat
cttcaccttgtattaaagacagtcaatgttctcaatgccctggaaattcccaccaacatc
tcaagtgctactgcactcagattgtgttcaacgttactgaacttcttcttcagatctttg
gaagttgaagacacaagaacatgctcttccatgttccattcttgtcggctatgtttgaaa
tacttgtgtaaagagactttcatccaatgcattgctctacgatttttgatggaaagtttg
ttcataaaggacattgcaattttgtttggtgcaaaacaaaatgttccagtatctaaagat
gaaaaagagaaaaagaactttcagtctttatatgaatccaacagaaaacaaggcttaact
acaactctccatcgaacacaatctactgtatttcatgcaggggtcataggtcaaggtcta
cgtttgtcaaaatcaggccctattcttcccaaggttcacgttgagagaaataagcagtgt
cttatgagtatcctgaggtgttgttctcatcaaacgaaacatacagaggaactgaagtct
ccaacagcagagagtgccatggagacggacgaagtgacggccaccccaccccacaggctg
aatgtgtcgggggacctgtgtcggatgatagggagcctgatgactgaactgatcactcca
gacgtcctgtacaacaatagattctggcctgaggaagagtccattcagatgacagtagaa
agagatttacaaatattcaaaaatatggatgacaacccagtgctttggcaaatccttgat
atgtatgctgcaagtcctttaacgatgtgcagatgttcccctatcttgaagtctctgact
gcctcactgatgattcattttgaatcctcacgagagaagtctgccagaaatacccctaaa
caactggaagcagcggcacacctcattacataccttggaaagagtcgcctgttgccagca
ccactgagatacgtatcagaactgttccacatggccacatcttttgaagtatacttgtta
ttgctgtctgtttggcgctatatgaaggaatttccacccactgaagaccctgatgaagtc
aacactcgagcttgtgaattgagacatctggagaccatccgatctataatgcataataat
gtggacagaatgggaaatttctatggacgatttttctcgcagttttcaacatcagattaa
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