Crassostrea virginica (eastern oyster): 111127431
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Entry
111127431 CDS
T09197
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111127431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111127431
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111127431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF7136
Stevor
HTH_62
Motif
Other DBs
NCBI-GeneID:
111127431
NCBI-ProteinID:
XP_022328313
UniProt:
A0A8B8DKJ8
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Position
3:complement(62037134..62048774)
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AA seq
466 aa
AA seq
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MSGGNLGAGFGTPNASTQGAPSGLTTAPSAGGGFSFGVQKPVSTGTPAAASPFSLSGQSQ
ASTPGGFNFGASGTTAGATSGFTFGQGSLGGGTQATPTQPNATASSGANLGGLAGFALGK
TPTLSTTNPPAPAGSGTTAGLTLGATCNSAPAGFSLPGQTAAAANKPLGISVGSIQGTSS
TGQTLGTPASTAATGISIGTASSSGGIQFSTAKTTAAPTLLGLVAGTSSGSSGNPTGVGF
QVSAVTTSSSAVSSTAGVSAAASSVVAPGSQMSYQQLEENINKWMSELEKQEQNFLELAT
QVNAWDRLLVENGEKITTLNCDMERVKVDQQKLDHELDFIHSQQRELEDLLAPLEKALEL
QPNISIQQHSASERENTYQLAENIDAQLKRMLSDLKEIIDHLNSSNINQDQNDPIQQITK
ILNSHMDSLQWIDQNTSLLGRKVDEISKQMEIQKREQERNFRLVYN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggaaacttgggggctggttttggaaccccaaatgcgtccactcaaggagca
ccttcaggtttgaccacagctccatctgctgggggtggattttcctttggagtacagaag
ccagtttccactggaacaccagcagcagcatcacctttctccttgtccggacaatcccaa
gcatctactccgggagggtttaactttggagcatcaggcaccacagctggagccacatcc
gggtttacttttggacaaggctctcttggaggtggtactcaggccacacccacccagcca
aatgccactgcatcctctggtgccaatctaggaggactggcaggatttgcattgggtaaa
acacccactttatcaacaacaaatccaccagccccggcaggtagtggtaccactgctgga
ctgaccttaggagctacttgtaattcagcaccagcaggatttagtctgccaggacagaca
gctgcagctgcaaacaaacccctcggaatatctgtcggttctatccaggggacaagttcc
actggccaaacactaggaactcctgcttcaactgcagctaccggaatttccattggtaca
gcctccagttctggtggtattcaatttagcactgcaaaaacaacagcagcacctactctc
cttggtttagttgctggcacttcttctggttccagtggaaatccaactggtgttggcttt
caagtttcagctgttactactagttcatcagcagtgagttccacagcaggagtctcggcg
gctgcctcatcagtggtggcccccgggtcccagatgtcctaccaacagctggaggagaac
atcaacaagtggatgtctgagctggagaaacaagaacaaaacttcctggagctggcaaca
caggtcaatgcctgggacagactcctggtggaaaatggagaaaagatcacaacccttaat
tgtgatatggagcgtgttaaagtagatcagcaaaaattggaccatgaactggactttatt
cactcacagcagagggaattagaggacctcttggctcccctagagaaagccctagagcta
caaccaaacatcagcattcagcaacactcagcttcagagagagaaaacacataccagtta
gcagagaatattgatgctcagctgaaaagaatgttgtcagatttaaaggaaataatagac
cacctgaactcctcgaatatcaatcaggaccaaaatgatccaattcagcaaattaccaaa
attttgaattcccacatggactctcttcaatggattgatcaaaatacttctcttcttgga
agaaaagttgatgaaatctcaaaacaaatggagattcagaaaagagaacaggaaagaaat
ttcagacttgtttacaactga
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