Crassostrea virginica (eastern oyster): 111127488
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Entry
111127488 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111127488
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111127488
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111127488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
zf-rbx1
zf-RING_5
Beta-prop_THOC3
WD40_Prp19
zf-Nse
WD40
WD40_like
zf-UDP
WW_TCERG1
Beta-prop_EIPR1
EIF3I
zf-ANAPC11
Beta-prop_SPT8
zf-RING_4
zf-RING_Vps41
WD40_WDHD1_1st
BRE1B
DUF2740
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
111127488
NCBI-ProteinID:
XP_022328397
UniProt:
A0A8B8DJR5
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Position
1:complement(56384832..56392697)
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AA seq
718 aa
AA seq
DB search
MSATSDGDDIQTDYASAPHNIQPQNIIETVPSSPNRERVSEQIIHNSPTSSRSQQTLAGY
FIGRRRSGATNDVPRPVPLNLGPAPPLPVFSISENQDASNVLVSLGAGGDIAEINNPPSP
EVISSDEELQSNEDVEVVSDPEEENPNLPQDPPAVESTTETEMATMSSEIPDNAQTHPPV
TEAAGLAPVVQQIQASTNSPSDFRTPKRRRMMSSPDKPGPANDNSGNDDEDGNSCPICFE
EWSTSGSHRLASLKCGHLFGQSCIEKWLKGQGGKCPQCNCKAKRQDIRVLYAKSLKAVDT
TERDRALQDLEKEREVRRKIEMEAAQCRLQYQLAIEECNRLKTELDKVKRQLQSTRSDSS
SGAVVSQSQARDFNGHFVLDKTIKIWEAGNCRVMSYTPSLATLVVSQPSSSPLFPGFGFK
KISCMDFKTSQYLTVHNKAIRDCCFHPFVDDGILLSCGLDKTAKMTSVISNTVVQTYNLA
NPVWSCIWNTDDRNFFYAGQANGNVVEFDIRNTSEHVQELNTEGIRSPVVSLQYIPKDIQ
ASFRPGGLVVGQLNKISFYEKKQDGQYRLHMLPLEGNLTSLSFENHTRHLLASFRPTSKH
PTSRHQLCEMTCVNLSADPAVIDNGCSCHVVHTFHGSQTQTVLTRALLMTHPVDDSRMLV
CAGEETSSGVHVWDTSSSQLVQRVPAGGVVVDTCTLRLNQQTYLAALTEKTLRIHRWC
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctacaagcgatggagatgatatccaaacagactatgcttcggcaccacataat
atacaaccccaaaatataatcgaaacggttccaagctcgccaaatcgcgagagagtgagt
gaacaaattattcacaactcgccgacatcctcgcgaagtcaacagactttggctggatat
ttcatcggtagacggcgaagtggagcaacaaatgatgtccctcgtcctgttcctttaaat
ctcgggccagcaccacctttacctgtgttcagcatctcggaaaatcaagatgcatcaaat
gttctggtttcccttggtgcaggtggtgatattgcagagatcaataatcctccctcacct
gaagtaatttccagtgatgaagaactgcaatccaatgaagatgtggaggtggtctctgat
cctgaggaagaaaacccaaacctacctcaagatccacctgcagttgaaagcacaaccgag
acagaaatggccactatgtcctctgaaattcctgataatgcacaaactcatcctccggtg
acagaagcagctggacttgccccagttgttcagcagatccaagcctcgaccaactccccc
tcagacttcaggacacctaaacgacgaagaatgatgtcctctcctgacaagccaggacca
gctaatgataattcaggaaatgatgatgaagatggaaattcttgtcctatttgctttgaa
gaatggtcaacatctggatctcacagacttgcatcattaaaatgtggtcacttatttgga
caaagttgcattgaaaaatggctgaagggccagggtggaaaatgtccccaatgtaactgt
aaagctaaaagacaagatataagagttctctatgccaagtcacttaaggcagtggacact
acagagcgagatagggcattacaggatttagagaaggagcgtgaggttcgcagaaaaata
gaaatggaagctgcccagtgtcgtttgcagtaccagctggctattgaggagtgcaacaga
ctgaagacggagttggataaggtcaaacgccagttgcagtccacaaggtctgactccagc
tctggggcagtggtttcacagtcacaagccagggacttcaatggtcattttgtattggat
aaaacaataaaaatctgggaggccggaaactgcagagtgatgtcttacacaccttcactg
gccactctggtcgtgtctcaaccttcctccagtcctctgttcccaggatttggtttcaaa
aagataagttgtatggatttcaagacttcacagtacctaacagttcataacaaggctatc
cgagattgctgctttcatccgtttgtggatgacggaattctcctgagctgtggattggat
aagactgctaaaatgaccagtgtcatcagtaatactgttgtgcaaacgtacaaccttgct
aatccagtctggagttgtatctggaacacagatgacaggaatttcttctatgctggccag
gccaatgggaatgtagtggagtttgacattcggaacacctcggagcatgtgcaggaactg
aacacagagggaatacgatcgcctgttgtctcattacagtacattccaaaagacattcaa
gcaagcttcaggcctggtggtttagtggtaggacagttgaataagatcagtttctatgag
aagaaacaagatgggcagtacagactgcacatgctgccattagaaggtaacttgaccagc
ctatcttttgagaaccacaccagacacctgttagctagtttcagacccacatccaaacat
cccaccagtaggcaccagctttgtgagatgacctgtgtgaacttgagtgctgaccctgct
gtcattgacaatggctgtagttgtcacgtggtccatacctttcatggcagccagacccag
acggtacttactagagcacttctaatgacccaccctgtagatgacagtagaatgctggtc
tgtgcaggagaagaaacttcctcaggtgttcatgtctgggacacgtcttccagtcaactg
gtgcagcgcgtgccggcgggaggggtggtggtggacacctgtaccctgagactgaaccag
cagacctacctagctgccctgaccgagaaaacactcaggattcaccgctggtgctga
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