Crassostrea virginica (eastern oyster): 111127521
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Entry
111127521 CDS
T09197
Name
(RefSeq) uncharacterized protein LOC111127521
KO
K20053
very low-density lipoprotein receptor
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111127521
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111127521
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
I-set
Ig_3
Ig_2
FXa_inhibition
SGL
EGF_CA
cEGF
V-set
ig
Vgb_lyase
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
111127521
NCBI-ProteinID:
XP_022328442
UniProt:
A0A8B8DJW5
LinkDB
All DBs
Position
3:44337090..44358490
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AA seq
1135 aa
AA seq
DB search
MSFFRSSCLFMYGIFLIYSGQSVEASVSCTVDEFQCSDKQCIDKLWQCNGDPDCNDQSDE
INCTTNDTMLCSVDTEWECHTGEQCINKFWKCDGDEDCLDASDELHCNTTCRPDQFKCDN
RECIYISLKCDGYIDCMDGSDEASCSTPTALCPSDKFDCYKNATLCIEASKLCDSRKDCE
NLADEDSELCERNRCNVNNGDCMQTCIPVDGNKRRCECLDGFRLVGNTSCEDINECVQWP
PVCSQKCSNEMKGSYKCECIPGYYPEILEDGQHVCKAIGERPWLLFANRHDIRKLEVDTM
TLQPIISDLRSAVAVDYDYYNKLVYWSDTDTEKIMKASMTGETNGTGVPVIGSGVKTPDG
MAVDWIHHNLYWTDTGYNTIEVASADGLMRKILVEKDLDEPRSIALDPRNGWMYFSDWGK
DPKIERIGMDGNPDSRTAIVKDDIVWPNGLCLDYGSERIYWIDARLKSIFTADLDGMNVH
RILHNSEQILHPFSLAVFEDNVYWTDWSARAIRKVHKYTGEQYSQLPFSFREPMGIKVYH
PQKQLHSPNKCGIANGGCSHLCLPTPAQFNANEYACVCPANITLLNGKQCETSDGSRNTT
ITKNERVVQFETIEEDTILTFPLHCSSNCNPPCKLNWFKDGKLLSDETNEVLNMPRNRTM
SGVYICRATGKEGTGTSKQVTVWVTYGPENVTITSPQAPIENTPFSLRCSADCLHGCESY
RWSDESGRLIKNTAILTFDNLNRTDNGNYTCSVEDYFGRISTKYNLKVQYGTTNVTIQYS
SDYGHLKEGQDYIRISCNADCNPECSYQYYKDNKFVNDPDRRLLVDRKMSGRYICSAKNS
FMNAYKDSTNFVDINIKYGPAITFTILENRKHISAHAPGTLNLTFNIDSFPTSNVTMFHN
KVNLKTISNVTGQHIFTKPIKSCLDEGEYQVDAANEVGSDSTSVIVNVTCSPILISFLNT
SDKEFRIGDRVDLTVAFKGNPAAEVSWTFKPWNSNTSLDVPVHRIQNQSKYRTALVIETL
NTNDFGTYKLQLKNIHGSISQDFKIQGPTPVSTETKKTSSTISSQVGLSQDRDLSPTSRR
GRLTTIREMELKNLVLEHTKLGEEIQKLREERKVLELKQQYYNIRLKQIVRGSKK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctttagaagttcatgtcttttcatgtatggtatatttctcatctatagtggt
caatctgttgaagcatctgtcagttgtactgttgacgagtttcagtgctcagacaagcaa
tgtattgacaaactgtggcagtgtaatggagaccctgactgcaatgaccagagtgatgaa
atcaactgcacaacaaatgacacaatgctctgctcagtggacacagaatgggagtgccac
acaggggaacagtgtatcaacaagttctggaaatgtgatggcgatgaggactgtttggat
gcttctgatgagttacattgtaacacaacctgcagaccagatcaattcaaatgtgataac
agggagtgcatctatatctccctgaaatgtgatggctatattgattgcatggatggttca
gatgaggccagttgttctacaccaacagcactatgtccaagcgacaaatttgattgctac
aagaatgcaaccctgtgtattgaagctagcaaactctgtgacagccggaaagactgtgaa
aacttggcagatgaagacagtgaactttgtgaaagaaatcggtgcaatgtgaacaatggc
gattgtatgcaaacatgcattcctgttgatggcaacaagcgacgttgtgagtgtttggat
ggattccgtcttgtgggcaacacttcgtgtgaagacatcaatgaatgtgtacagtggccc
cctgtgtgctctcaaaagtgcagcaatgagatgaaaggatcgtacaaatgtgaatgcata
cccgggtactacccagaaattctcgaagatggtcaacatgtttgtaaagcaattggtgaa
agaccctggttgttgtttgccaacagacatgacatccgcaaactggaggtggataccatg
acactacagccaattatcagtgatctgcgtagcgccgttgctgtggactatgattactac
aacaaattggtgtactggtctgatactgatacagagaaaatcatgaaggctagtatgaca
ggagaaaccaatggcactggagtgcctgttattggaagtggtgtgaagacccctgatgga
atggccgtggactggatccatcacaatctgtactggactgacaccgggtacaacaccatt
gaagttgcttctgcagatggattaatgaggaaaattcttgttgaaaaagacttggatgaa
cctaggtcaattgctttggatccaagaaatgggtggatgtacttctctgactggggaaaa
gatcccaagattgagcggattggaatggatggtaacccagacagtagaacagctattgtg
aaggatgatattgtatggccaaatggattatgcttggattatggcagtgaaagaatttat
tggattgatgctaggttgaagagcatcttcacagctgatctagatggaatgaatgtccac
agaattcttcacaattctgaacaaatccttcatccattttcattggctgtttttgaagat
aatgtttattggacagattggtcagcaagggcaattcgcaaagtgcacaaatacacggga
gaacaatacagccaactgccctttagtttcagagaaccaatgggtatcaaagtgtatcac
ccacagaaacaattgcacagtcccaacaaatgtggcattgctaatggtggttgttctcat
ctttgcttgccaaccccagcacagttcaatgcaaatgaatatgcttgtgtctgccctgct
aacataacgcttttgaatggaaaacaatgtgaaacaagtgatggatcaagaaatacaacg
attactaaaaatgaaagagtcgttcagtttgaaaccatcgaggaagacacgattttgaca
ttcccccttcattgctcatcaaactgtaatcctccatgtaaattaaattggttcaaagat
ggaaaactgttatctgatgaaacaaatgaggttttaaacatgccccgcaatagaacaatg
tcaggagtttatatatgtagagcaactggaaaggaaggaaccggaacgtctaaacaggtg
acggtctgggtgacatacggaccagagaatgttactatcacatcgccacaagcaccgata
gaaaacaccccatttagtcttcgttgttctgcggactgcttgcacggctgtgagtcgtac
aggtggtcagatgaaagtggacgattaatcaagaatacagccattctgacctttgataac
ctaaacagaacagataatggaaattacacatgctctgttgaggactattttggacggatt
tctactaaatacaacttgaaagtgcaatatggtacaacaaatgtcacaattcagtacagc
agtgattatggtcacttgaaggaaggacaagactacattagaataagctgcaatgctgac
tgtaatccagagtgttcataccagtattataaagacaacaagtttgttaatgatcctgac
aggagattattggtagatcggaaaatgtctggtcgttacatctgttcagccaaaaattct
tttatgaacgcttacaaggattctacaaactttgtggatataaacattaaatatggacct
gcaataacatttactattttggaaaatcgtaagcacatatctgcccatgcaccaggtaca
ctgaatttaactttcaacatagacagttttcctacttcgaacgtaacaatgtttcacaat
aaagtcaatttgaagacaatatcaaacgtaactggacagcacatatttacaaaaccaata
aagtcttgtctggatgagggagagtaccaagtggatgcagccaatgaggttggatcggat
agtacctctgttatagtaaatgtaacatgttcacctattttgataagttttttaaatacg
tcggacaaagaatttagaattggagatcgagttgatctgacagttgcctttaagggaaat
ccagcagcggaggtgtcctggacctttaaaccttggaacagtaacacgtcactggatgtc
ccagttcacagaatacagaaccaatcgaaatatcgcacagctctcgtgattgagacattg
aatacaaacgactttgggacctataagctgcagttaaaaaatattcatggaagtatcagt
caagatttcaaaattcaaggtccaacaccagtatccactgaaaccaagaaaacgtcatca
acaatttcaagccaagtaggacttagccaagatagagatttatcgccaacatcaagaaga
ggaagactaacaacgataagggaaatggaattaaagaaccttgtgctagagcacacaaaa
ctaggggaagaaatccaaaaattacgagaggagagaaaggtcttggagctgaaacagcag
tattacaatattcgattaaagcagattgtgaggggctcgaaaaaataa
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