Crassostrea virginica (eastern oyster): 111127553
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Entry
111127553 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 23-like
KO
K22555
TBC1 domain family member 23
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111127553
Membrane trafficking [BR:
cvn04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111127553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
Rhodanese
RabGap-TBC_2
LPD5
Motif
Other DBs
NCBI-GeneID:
111127553
NCBI-ProteinID:
XP_022328482
UniProt:
A0A8B8DK04
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Position
3:complement(39414534..39428746)
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AA seq
680 aa
AA seq
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MADGIDDTSWVTDLETALVESCDFGTIRNICKCRTVPEHLRAEVWQICLNVQNKGDALSA
FDGLYDLDEQXSIREDCRALVDKLGNEEEDKXSIVSDLESIITFFSKSRNEKYSTDNGWL
EVIQPXLALKLTRTQLYNCFYSIVNKYIPRDCVKGGKPFHLFRLLLQYHDPELSSFLDTK
RILPDVYCHSWFRSLFSAPCDLQVIQVMWDVYFQHGDQFLTFFMALVILVNARDQILTGE
LDSKQEIAEMLASFPSGLEAEDIEDFCALAQYYASRTPQSFRRDYQNPLFSNSLMSEKEG
EDLQVSQALCLPVAVGELLQNNNQSGVDGVRYFVVDCRPADQYNNGHLSTAFHLDANLML
QNPKEFSTAVQALLASKQQSIISGSVAGGEHLCFMGSGREEEDQYVHMVIANFLQKHHQY
VSFAKGGYQSLHELLKDRLSESLSSHSPKHCIVCNPDAAHSSSDLENGEDFHRPGKEEEN
GESFFGKLTSTMKSKSAVMKQKLTDYIKNEHQTQESRHVSNTDRVGKRYRNMANVFSIGD
DDDGEDTMGNSDDDERKEVVNIEVWLKKPDIKYACKCQEVIGNGYMFPSHLLVTDTHLYV
LREIPTRKDMAHIQARRALGSVVKITSKKKHPDFVTFKYGSVEGENIQVTDIDRFLLPKA
TEATKIIKQQIIKVLDALDS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggaattgatgacacaagctgggtaacagacctggaaacggcactggttgaa
agttgtgactttggaacaatcagaaatatctgtaaatgccgtaccgttccagaacatctg
cgagcagaggtttggcagatctgtctaaatgttcaaaataagggagatgctctgagtgca
tttgatggattgtatgatcttgatgaacagngaagcatcagggaagactgcagagctcta
gttgacaaactaggaaatgaagaagaggacaagntttcaattgtcagtgatttagaatcc
attataacatttttttcaaaatccagaaatgagaaatattcaacagacaatggctggcta
gaagtcatacagcctntgctagctcttaaattaaccaggacccagctgtacaactgcttc
tattccattgtgaacaagtatataccaagagactgtgtgaagggaggaaaaccatttcat
ttgtttcgcttgctcctgcagtatcatgaccctgaactgagctccttcctggacaccaaa
agaatcttgcctgatgtttactgccattcttggttcaggagtttgttttctgcaccctgt
gatttgcaagtgattcaagtaatgtgggatgtgtattttcaacatggagatcagtttctt
acatttttcatggcccttgtcattttagtcaatgcaagggatcaaatattgactggagaa
ttggactcaaaacaagaaattgcagaaatgctagcatcttttccatccggcttggaagca
gaagatatagaagacttttgtgcattagcacagtactatgcatcaagaacaccccagtcc
ttcagaagggattaccagaatccactcttcagtaatagcttgatgtcagaaaaagaaggg
gaggatctacaagtgtcacaagcattatgcttgcctgtggcagtaggagaacttctccag
aacaacaaccaatcaggagttgatggcgtgcgttatttcgttgttgattgtcgtccagca
gaccaatacaacaatgggcatttatccaccgcattccatctcgatgctaaccttatgttg
caaaaccccaaagagttcagcacagctgtacaggcattgcttgcttctaaacagcagtcc
ataatatcaggttccgtagcagggggagagcacctgtgttttatgggcagtgggagggaa
gaggaagaccagtacgtccacatggtcatagccaacttcctacagaaacatcaccagtat
gtcagcttcgccaagggaggctatcaaagtttacatgaacttctgaaagatagactttcc
gaaagcctgtcaagccatagccccaaacactgtattgtgtgcaaccccgatgcagcacac
agctctagtgatctggagaatggagaagatttccataggcctgggaaggaagaagagaat
ggcgaatcattttttggaaaattgacctctactatgaaaagcaagtctgctgtgatgaaa
caaaaactaacagattacataaaaaatgagcaccaaacacaggaaagcaggcatgtgagc
aatacagaccgtgtgggcaaaagatacaggaatatggcaaatgttttttctattggggat
gatgatgatggtgaggatactatggggaactctgatgatgatgaaagaaaggaagttgtc
aacattgaggtgtggctgaagaaaccggacattaagtatgcgtgtaagtgtcaggaggtc
atcggcaatggatacatgtttccaagccatctgcttgtcacagacactcatttatatgtt
cttcgtgaaattcccacacggaaggatatggcccatattcaagctcgcagggccctagga
agtgtcgtgaaaattacatcgaaaaagaaacatccagactttgttacttttaaatatggt
tctgtggaaggggagaacattcaagtgacagacattgacagattcttactcccaaaggcg
acggaagccaccaaaatcattaaacagcaaatcatcaaagtgttggatgcattagacagc
tga
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