Crassostrea virginica (eastern oyster): 111127729
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Entry
111127729 CDS
T09197
Name
(RefSeq) condensin complex subunit 1-like isoform X1
KO
K06677
condensin complex subunit 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111127729
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
111127729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Adaptin_N
SCD
HEAT_EZ
HEAT_2
Cnd3
Motif
Other DBs
NCBI-GeneID:
111127729
NCBI-ProteinID:
XP_022328669
UniProt:
A0A8B8DLN8
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Position
4:complement(45940856..46144490)
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AA seq
1486 aa
AA seq
DB search
MMTFDFIIPSQKDDLLNKTEINQYVVDEILSLREIPSALQAVKSSFRGNGAKCLLEKFDV
LFSVLCLKKDIQPDLKEDAWQLILKVGKSLATETAGVLEETSLEPGSRLSYLNQVKMLCY
LLCQFMDMFEDDVKEKCDVITTGKGRGKSTKKSTDIAIDWEVERENGVKTLLHLVSLNIL
RLWDPPIAEVEFVNMITNLVYKLLENPSIVYVKAKETRTAIFNIVGVMVKRYNHALSASL
KILQLLQHFEHLVSPLAEMTSIITTDYGNKSVVSEIMREIGRKDPKDLVRDNTGTKSFAT
FLVELSERVSGVMMSNISVILCHLEGESYTMRNGVLGVMGEILFKVLSKDNLEDKLKDTR
DQFLEKLEEHIHDVNAFVRSRVLQIWLNLVNEKCLPLQRHEHLLGLSIGRLQDKSSQVRK
QAIQLVTAFIKSNPFAAKLSLEDLKANYEKEKEKLENMAPEEHSVFDDSALTKIEEEWKP
LEKKLMKALKKSDEEESMEEDNNEELIQDEETSNSVMDRIYNLLTEEKFSEAILLLSAFK
EAYPDNCFLQELTKESQSEADMEDSQRSTDVKTDLGYFRMMFYGHKKQSLVISSGLEEEK
EKDPIVNVISKQQVLVQYLKDCFAFATQIQAAVPVICQLLGSKTNTDILEAIDFFVTGFE
FGVTLTMIGIRRMLHLIWSRESSVKEAVVSAYKRLYLNPQGGNQRSKAFSIVKNLSALLS
GANLGDLTSLEGLVVELMKSGEIDQSVIQMLWERFAMKVPNTSMEESRAAITLIYMIAGA
DMGVVKSNIDVLVKEGLGERAESDFILARDTCLALLKLGPPKRVQGQLQAEPLRFPQNYQ
MFERLQTLLIDGVQQLDNPHWIPFGEQAINVIYKLAEHPDIICGDVIKALAKEVTKAEQE
NRDLSQGNQMEEDKQEGEEERHEGEEAIKADDIQDGGPRSSQPGSQPSSQPSSSATVILT
RLIALAGQVAFRQMVHLDTYVFGELKRRRAIQEQKKDMKTPRADKRGSKVDKTTSEAIED
ELGLAGAAEEDADAEFIRKVCDVEIVTGDSLLGSIGPLLVTVCTNQSRYSDPNLRTAATL
ALAKFMLVSADFCESNLQLLFTILEKSPFPTIRANTIIALGDLTVRFPNLIEPWTQHMYA
RLRDESQTVRKNTLQVLTHLILNDMVKVKGQISEVATCVVDHDERISSLAKLFFNELSHK
GNAIYNIMPDVISRLSDPDIGVDEEHFRIIMKYLFSFIQKDRQCESLVEKLCHRFRGTKT
DRQWRDLSFCLSMMSYSEKSIRKLQENFACFGDKLADDEVYNCFCTIISKSRSFAKPTAK
TLIDELEQRVQQCHTKGLEEGEITTKASQASQAAGQVKPKSRAKSSKTPAKGKTPARGKR
GCRQQLDSSADEDYVDGNENTTPQRGKRQTKGRQTRQKPKVSFDSDSDSEIELFDLDKSS
QGTLGTSAADSDQSDDSDLIPTKRTGRRVLNAPRRTLPLHDLNGDV
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttttgattttatcattccttcccagaaggatgaccttctcaataaaacagag
attaatcagtatgtagtggatgagattctctcactgagagaaatacctagtgctctgcaa
gctgtgaaaagcagttttaggggtaatggagccaagtgtttgctagagaagtttgatgtt
ttgttcagtgtactttgtttaaagaaggatattcaacctgatttgaaagaagatgcttgg
cagttgattttgaaagttggtaagtctttggccacagaaacagccggtgtattggaggaa
acatctctggaacctgggtctcgtctgtcttacctgaaccaggtgaaaatgttgtgctac
ctgctctgccagtttatggatatgtttgaggatgatgtgaaagaaaagtgtgatgtcatt
acaacaggaaagggtcgtggaaaaagcacaaagaaatcaactgacattgctattgactgg
gaggtggagagagaaaatggagtgaagacattgctccacttggtgtcactgaacattcta
agactttgggatccaccaatagcagaagtagagtttgtgaacatgataaccaatctggtg
tacaaacttttggagaatcccagcattgtatatgtgaaggccaaggaaactcgcaccgcc
atatttaacattgtgggggtaatggtgaaacgctacaaccatgcactcagtgccagtctg
aagatcctccagctgctacagcactttgagcacctagtgtcccccctggcagaaatgacc
agcatcatcaccaccgattatggcaataagagcgtggtgtccgaaatcatgcgggagatc
ggcaggaaggacccaaaggacctggtgcgtgacaacacaggaacaaaatcatttgccacc
tttctagtggagttgtctgagagagtttctggtgtgatgatgtccaacatcagtgttatt
ctctgtcacttagagggagagtcttacacaatgaggaatggtgttctgggagtgatgggg
gaaatcttattcaaggttctcagtaaggacaacttagaggacaagctcaaagacacacgt
gaccagtttctggaaaagttagaggaacatatccatgatgtcaatgcctttgtaaggagt
cgtgttctccagatttggttaaatctggtaaatgagaagtgccttcccctgcagcgacat
gaacacctactggggctcagcattggtcgactacaggacaaatcttcacaagtacggaaa
caggccatacagcttgtcacagctttcatcaagtccaacccatttgcagcaaagctatcg
cttgaggacctaaaggcaaactatgaaaaagagaaagagaagctggagaacatggctcct
gaggaacactcagtctttgatgattcagccctgacgaagatagaagaagaatggaaacct
cttgagaaaaagctgatgaaggcattgaagaaatcagatgaagaggaaagcatggaggaa
gacaacaatgaagaactgattcaggatgaggagacgtcaaatagtgtcatggacaggatt
tacaacctgctgacagaggaaaaattctcagaggccattctgttgctgagtgccttcaag
gaggcctatcctgacaactgttttctgcaggagttaaccaaggagagccagagtgaggct
gatatggaagattcgcagagatctactgatgtaaagacagaccttggctacttcaggatg
atgttctatggtcacaagaagcagagtttggtcattagttcaggcttagaggaggagaaa
gagaaggaccccattgtgaatgtgatctctaagcagcaagtccttgtgcagtacttaaag
gactgctttgcctttgccactcagattcaggcagctgttccagtgatctgtcagctcctg
ggatcaaagaccaacaccgacatactggaggctatcgactttttcgtcacaggattcgag
tttggggtcacactgacgatgattgggatccgccgaatgttacacctcatctggtcccga
gagtccagtgtcaaagaggcagtggtctccgcatacaagcgactctacctcaatcctcaa
ggggggaaccaaagatccaaggctttctccattgtgaagaacctatcggctttgttgtcg
ggggcaaatctaggagatctaacatccttagagggattggtggtagagctgatgaaatct
ggggagatagaccagagtgttatacagatgctgtgggagaggttcgccatgaaggtccct
aacaccagcatggaggagagccgtgccgccatcactctgatctacatgatagcgggggct
gacatgggggttgtcaagagcaacattgacgtccttgtgaaggaagggctgggggagagg
gcagagagtgactttatactggcccgggacacttgcttggccctactcaagctggggcca
cccaagagggtgcagggacagcttcaggcggaacctctcaggttcccccaaaactatcaa
atgtttgagcgactccagaccctgctcatcgatggtgttcagcagttggataatcctcac
tggattccatttggagaacaggccattaatgtgatttacaagcttgcagaacatcctgac
atcatctgtggtgatgtcatcaaagcattggcaaaggaggtcaccaaagcagagcaagaa
aatcgggatctcagtcaaggtaatcaaatggaggaggacaaacaagagggagaggaagag
cgacatgaaggggaggaggctataaaggctgatgatatacaggatggtggtccaaggagc
agccaacctgggagtcagcccagtagccagcccagctcatcagccacggttatcctcact
cgactgattgcactggccgggcaagtggccttcagacagatggttcacttggatacctac
gtgtttggggaactgaagcggcggagagcaatacaggaacagaaaaaagacatgaaaacc
ccgagagctgacaaacgaggaagcaaagtggataaaaccacatctgaggcaatagaggat
gagcttggtctggcgggggctgcagaggaggacgctgatgctgagttcatacgtaaagtg
tgtgatgtggagattgtcactggtgatagcctgctaggaagtattggtccactgctggtg
actgtctgtactaaccagagcaggtactccgatccaaacctgaggacggcagcaacacta
gccctggccaagttcatgctggttagtgctgatttctgtgagagtaaccttcagctatta
tttacgatactagagaagtctccattccctacgatacgagccaacacgatcatcgctctt
ggggatctgacggtcaggttcccaaacctgatagaaccctggacgcagcatatgtatgcc
agattgcgagatgaatctcaaactgtgagaaagaacaccttacaagtgctgactcatctc
attttgaacgacatggttaaggtcaaaggccagattagtgaggttgctacctgtgtagtg
gaccatgacgaaagaatctccagtctggcaaagcttttcttcaatgaactttctcacaag
gggaatgctatatacaacataatgcctgatgttatcagtcgtctttctgaccctgacatt
ggtgtggatgaagaacacttccgcatcatcatgaaatatctgttctcctttatacagaag
gatcgacaatgtgaaagcttggtagaaaaactctgtcaccgcttcaggggaacaaagaca
gacagacagtggcgagacctgtctttctgtctatctatgatgtcatacagcgagaagtcg
atccggaaactccaggagaactttgcctgttttggagacaaattagcggacgatgaggtg
tacaactgtttctgtacaattatcagcaaatccaggtcttttgccaaacccacagcaaag
actttgattgatgagctggagcagcgagtacagcagtgtcatactaaagggctggaggaa
ggtgagatcaccaccaaggccagccaggcctctcaggcagccgggcaggtcaagcccaaa
tcccgcgcaaagtcctccaaaactcccgccaagggcaagacacctgctcgaggtaagagg
ggctgtcggcaacaattagacagcagcgcagacgaagactatgtggatggcaacgaaaac
acaacaccccagagggggaaacgtcagactaaggggagacaaacgcgccagaaacccaag
gtgtcgtttgattcggattctgacagtgaaatagagctgtttgatctagacaaatcatcc
caagggactctgggaacctcagcagctgacagcgaccaatcagacgactcggatctcatc
cccaccaaacgcaccggcaggcgtgttctgaatgcccctcgccgaacactgccactccat
gacctcaatggcgacgtctga
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integrated database retrieval system
