Crassostrea virginica (eastern oyster): 111127987
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Entry
111127987 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: protein fem-1 homolog B-like
KO
K10349
protein fem-1 homolog B
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111127987
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
111127987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_10
DUF7809
TPR_NPHP3
TPR_12
Motif
Other DBs
NCBI-GeneID:
111127987
NCBI-ProteinID:
XP_022329041
UniProt:
A0A8B8DPY3
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Position
4:8147397..8168191
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AA seq
635 aa
AA seq
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MKTAEEIGALKQCVHSAARDGRAISIFAMLWNLDKHLLDDILDCRTSENGQITTPLIIAC
RNGEEKVVSILLSKFKINLEQTGTVKFDGFVLEGATALWCAAGAGHLGIVKLLLEHGADV
NHATKTNSTPLRAACFDGRLEVVQCLVENGADISIPNKYNNTCLMITSYKGHXSVVRYLL
EKGACNPDSTAHCGATAMHFAAECGYLEVVKDLVRFYGKQIPNDYGMTPLLVAAECGKSA
VVEFLTTNVETKEEKINAYELLGASFANDKENYDVMKAFTFLCEAMHLRYSDPDNITXIT
KEDYPCVEAYNNRVECKTLGERNAVKYDFEALHMESLTIRERILGPDNPDVLHPIIFRGA
AYADSKRFDRCIALWLHAMKLSHKNKRSIAKDLLRLSQVFAEMIHINEPVLFVNVKEVFK
YAMAELTNDKEKIMNSEDDRDALFEIHQTNIHTCLYLLAIILKTEQDEKEIGELYSLVYQ
FQKLNPILKNGYTLLHMAVDSATFVDDFHVDDVVSFPDSGVARLLIKCGGDVNAQDFAGN
TPMHALVNISSKASVNVKEVELTMQVLIDSDAHLDICNKDRKTTMDYAKREEDAMILRAS
FQLSLKCLTATYIRNNEIPYQNLIPSLLEEFLSLH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgcggaagaaattggagcattaaaacaatgtgtacattcagctgccagagat
ggaagggcaatcagtatatttgctatgttatggaatcttgacaaacatctcttggatgac
atattggactgccgtacaagtgaaaacggacaaataactacaccccttattatagcatgt
agaaatggcgaggaaaaggtggtttccattttattgtcaaaattcaaaataaatctcgaa
cagactgggacagttaaatttgatggatttgtgttggagggcgccactgctctatggtgc
gcagcaggtgcaggacatctcggtattgtaaaacttttactggagcatggagcagacgta
aaccatgctacaaaaacaaactccactccacttcgtgcagcgtgtttcgatggacgacta
gaggttgtgcaatgtttagtagaaaatggagcagatatttccatccccaataaatacaat
aatacctgtcttatgataacgagttataaaggacatngttcggttgtgcgttatttactt
gaaaagggggcttgtaaccccgactccactgcccattgtggagcaacagcaatgcacttt
gctgcagaatgtggctacttggaagtggtcaaggatttagtaagattttatggaaagcaa
atccccaatgattatggaatgaccccattgttagtggctgcagaatgtgggaaatctgct
gtcgtagaatttctgaccaccaatgtagaaactaaagaagagaaaataaatgcatatgaa
ctgcttggtgcttcttttgcaaatgacaaggagaattatgatgttatgaaagcgtttaca
tttctttgtgaagcaatgcatctacggtacagtgatcctgataatattacatgaattacc
aaagaggattatccttgtgttgaagcctataacaaccgtgtcgagtgtaaaaccctcggt
gagcgcaatgcagtcaaatatgactttgaggcactgcatatggagtcgttaactattagg
gagaggattctgggccccgacaatcctgatgttcttcatccaatcatatttcgaggagcg
gcgtatgctgacagcaagcgctttgatcgatgcatagccctgtggttgcatgccatgaaa
ttaagccataaaaacaaaagatccattgccaaggacttattacgcctttcacaagttttt
gcagaaatgattcacattaatgaaccagtattatttgtaaatgtgaaagaggttttcaaa
tatgctatggcagaattaaccaatgacaaagagaaaataatgaattctgaagatgatcga
gatgctttattcgaaatccaccaaacaaacattcatacttgcctatatcttcttgccatt
attttaaaaaccgaacaagatgaaaaagaaataggagagttgtactcgctggtctatcag
ttccagaaattaaatcccattcttaaaaatggttacactctgctgcatatggcagtggat
agtgccacatttgtggatgattttcatgtggatgacgtggtatcatttccagacagtgga
gtagcccgacttttgatcaaatgtggtggagatgtcaacgctcaggattttgcgggaaac
accccgatgcatgccttggtaaatatctcatcaaaagccagtgtcaatgtgaaagaggtg
gagcttacaatgcaagttttgattgacagtgatgctcatttagacatttgtaacaaagat
agaaaaacaacaatggactatgcaaaaagagaggaagatgcgatgattctgagagcatca
tttcagctttccttaaagtgtctaacagccacatacatccgcaataatgaaattccatat
cagaatttgattccttcacttttggaggaatttttgtctctgcattag
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