Crassostrea virginica (eastern oyster): 111128088
Help
Entry
111128088 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 8-like
KO
K16781
tetratricopeptide repeat protein 8
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111128088
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
BBSome
111128088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_7
ANAPC3
ARM_TT21_C
ARM_TT21
TPR_30
PPTA
Fis1_TPR_C
Coatomer_E
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
111128088
NCBI-ProteinID:
XP_022329236
UniProt:
A0A8B8DQI2
LinkDB
All DBs
Position
4:complement(5456460..5480789)
Genome browser
AA seq
499 aa
AA seq
DB search
MDPLFLAYSYFRRKKYEQCTEICTQLLEKNPYDQAAWTLKTRALTGQVYVDEVDVDEEGI
AEMVMDDNTIAQVSRPGTSLKQPGTGRGAPSQGVRPMSQSGRPLSGFVRPSTQGGRPGTM
EKAIMTPRTAHTARPVTSASGRYVRLGTASMLSTPDGPFINLARLNFSKYASRPNLAKAL
FEYIFHHENDVRNALELAALATEACQFKDWWWKVQLAKCYYRLGMYRDAERQLKSSLKQQ
DHVDTYLYLCKVYCRLDQPLTAIEVYKQGLEKFQGETTLMTGIARIYEGMNDMDNAVKFY
KDVLNYDSMYVEAIACIATNHFYTDQPEVALKFYRRLLQMGVYNAELFNNLGLCCFYAQQ
YDMTLTCFERALSLAEEVTLAEVWYNIGHVALGIGDMTLAYQAFRLTLANNNDHAEAYNN
LXVLELRKGHVEMARAFFQAAVSLAPHMYEPHYNWAALADQLGDLQSSYNAAKRAVDAFP
NHVDSKELLKQLKHHFSLL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatcctctcttcctagcttacagttatttcagaaggaagaagtatgaacagtgtaca
gaaatatgtacacagttattagagaaaaatccatacgatcaggctgcatggactttaaag
accagagcattgacaggtcaagtatatgttgatgaagtggatgtggatgaggagggcata
gcagagatggtgatggacgataatacaatagcccaagtatctagaccggggacgtctctg
aaacaaccaggaactggtcgaggggcaccaagccagggagtaaggcctatgtctcagtct
ggccgccctttgtcaggatttgtccggcccagcacacagggagggagaccgggcacgatg
gagaaggccatcatgaccccccgcactgcccacacagcccgcccggtcaccagtgcctct
gggcgctacgtccgactcggaacagcatcaatgctctcaacaccagatggtcctttcatc
aacttagcgaggctgaacttttcaaagtatgcctcaaggcccaatctagccaaggcactg
tttgaatacatatttcaccatgagaatgatgtgcgaaatgcattagagcttgctgcattg
gccacagaagcttgtcagttcaaagactggtggtggaaggtacaactggccaagtgctat
tatagactagggatgtaccgagatgctgagagacaattgaagtcttccctaaaacaacaa
gaccatgtggacacatacctttacctgtgtaaggtgtactgtcgactggatcaacccctg
acggccatagaagtctacaaacagggactagaaaagttccaaggggagaccactctaatg
acggggatagccaggatttatgagggaatgaatgatatggataatgcagtaaagttttat
aaggatgtgctgaattatgacagtatgtatgtggaggccatagcctgtatagccaccaac
cacttttacacagaccagccagaagtggcactaaaattctacagacgcttactacagatg
ggtgtgtataatgctgagctcttcaataacctgggcttatgctgcttttatgcccagcag
tatgatatgaccttgacctgttttgagagagcattgtcattagcagaagaggtcacctta
gccgaagtctggtacaatataggccatgtagcattgggtattggagacatgacactggct
tatcaagcatttaggttgaccctagccaacaataatgaccacgcagaggcgtacaataac
ctgngggtcctggagctccggaaaggccatgtggaaatggctagggcctttttccaagca
gcagtgagtctggccccccacatgtatgaacctcactataactgggctgccttagcagat
cagttgggagacctacagagcagttacaatgcagctaagcgagcagtggatgctttcccc
aaccatgtggattccaaggagcttctaaaacagctcaaacatcacttctctcttctgtag
DBGET
integrated database retrieval system
