Crassostrea virginica (eastern oyster): 111128233
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Entry
111128233 CDS
T09197
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111128233
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111128233
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
90S particles
Helicases
111128233
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Cas3-like_C_2
P-loop_SecA
MCM2_N
Motif
Other DBs
NCBI-GeneID:
111128233
NCBI-ProteinID:
XP_022329447
UniProt:
A0A8B8DMP7
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Position
4:complement(56815846..56822431)
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AA seq
461 aa
AA seq
DB search
MASSSKQKSKSGEQFEKLGLNEWLWSQCHTMGLRQPTPIQVNCIPPILEGKDCIGCAKTG
SGKTAAFALPIVQKLSEDPFGIFALVLTPTRELAFQIAEQFNVLGKPINVRVTVITGGLD
MMQQGIDLQVKPHIVISTPGRLADHLQSCDTFSLRKIKFLVLDEADRLIEDDFGEQLETI
FKVLPKKRQTLLFSATMTKHLKDLQDVAMNKPFFWQQKSEVATVEGLKQYYVLMPADIKD
AYLVHILDKYTEANKKSSIMIFTNTCKYTQILGMVCTQLGLPCVVLHSMIRQKERLAALA
KFKSNQINILIATDVASRGLDIPTVDLIINHNVPNKPKDYVHRVGRTARAGRHGTAITLV
TQFDVRLVHAIEEFVNSKMDEYDTKEKDVMKILVEVATAKREAEIRLDERDFGVQKEINK
RKKLLMEGKDPDEEARKRQKYIREKNQATKKRRLEKNQPKT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttctagtaaacagaaatcaaaatctggcgaacagtttgagaagctgggacta
aatgaatggctatggtcacagtgccatacaatgggccttcgtcagccgacaccaattcag
gttaattgtatcccaccaattttagaaggaaaagactgcattggttgtgcaaagacagga
agtggtaaaacagctgcatttgctctgcccattgtacagaaactgtcagaggatcccttc
ggaatatttgcactggttttgacaccaacaagagaattggccttccagattgctgagcag
tttaatgtacttggtaaacctataaatgtgagggtcactgttattaccggagggctagac
atgatgcagcaagggatagatctgcaggtgaagccccacatagtgatctcaactcccgga
cgattggctgatcatctacaaagctgtgatacattcagcttacgtaaaatcaagtttctt
gtgctggacgaggcagaccggctgatcgaggatgactttggagaacaattggagacaata
ttcaaagttctccccaaaaagcgacagacactcctattcagtgcaacaatgacaaaacac
ttgaaggacttgcaggatgttgcgatgaacaaaccctttttctggcagcaaaaatctgag
gttgccactgttgagggtttgaagcagtactatgtcctgatgcctgcagatatcaaggat
gcctaccttgtgcacatcctggacaaatatacagaggccaataagaagagctccatcatg
atctttaccaacacatgcaagtacacacagattcttggaatggtttgcacacaactaggc
ttgccctgtgtggtgcttcattcgatgattcgacagaaggagcgattagccgccctggct
aagtttaaatccaaccaaatcaacatccttatagccacggatgtagccagcagaggatta
gatattcctacagtagatttaatcatcaaccacaatgtcccgaacaaacccaaggactat
gtccacagagtggggagaacggctcgagcaggtcgccatggaacagcgatcaccttggta
actcagtttgatgttcgccttgttcatgccattgaggagtttgtcaattccaagatggat
gaatatgacacaaaggaaaaagatgtgatgaaaatactggtggaagtggccacagcaaaa
agagaggcagagataaggttagatgagcgtgactttggtgtacagaaggagattaacaag
aggaagaagttgttaatggagggaaaggaccctgatgaggaggcgagaaagagacaaaag
tacattagagagaaaaaccaggccacgaagaaacggagattggagaaaaatcaacccaaa
acctga
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