Crassostrea virginica (eastern oyster): 111128419
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Entry
111128419 CDS
T09197
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111128419
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111128419
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Helicases
111128419
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
UTP25
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
111128419
NCBI-ProteinID:
XP_022329726
EnsemblRapid:
LOC111128419
UniProt:
A0A8B8DRW6
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Position
1:complement(15527108..15530733)
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AA seq
590 aa
AA seq
DB search
MKSTEMTDTTWGELPVSLSETVLQTVLDAGFVHPTPVQASCIPLFLSNKDVAAEAVTGSG
KTLAFLVPVLEILRKRGSWSKKEIGAIIVTPTRELAIQINEVLSQFLTDTPDLTSLLLIG
GENIVKDAEKFKANGGNIIIATPGKLETMLEKPQNGLNLAASVRSLEVLVLDEADQLLDL
GFEASINTILSYLPKQRRTGLFSATQTDELENLIRAGLRNPVRVNVKEKKKDDGKMEQRT
PSTLQNFYMIVESDQKFNQMMNFIQARRREKIMIFFSTCAGVDYFSKMLQLILKNTQVLC
LHGKMKNKRNKVFAKFRALESGILVCSDVMARGVDIPEINWVIQYDPPKLANFFVHRCGR
TARIGNTGNALVFLLPAEDTYLNFLKINQRVVLQKLDSCDSVNNYLPKLRKFALKDRALM
EKGAKAFVSFVQFYGKHECGLIFRIKDLDFGKLANGYGLLRIPKMPEIKGKDVSNFVPVE
TDFNNIAYKDKHREKQRQEKLQSEEPKTSKFRRPPRSQPWSKQKERKERKKKRREQKEIS
RKRKAEDRETVGNEEEEDFQEDVKLLKKLKRGKISKEEFDSQFAPSDDDD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctacagaaatgacagacaccacgtggggagaactaccagtatctttgagtgaa
acagttctacaaacagttcttgatgccggatttgtccatcctacacccgttcaggcttct
tgtatacctttatttttgagtaataaagatgttgcagcagaagcggtgacgggaagtggt
aaaacattggcattcttggttccagtcctggaaatcttaagaaaaaggggcagttggtcc
aaaaaagaaattggagccatcatcgttactcctacaagagagcttgcaatacaaattaat
gaggttttgtctcaattcctcacagatacccctgatcttacatcattgcttctcatagga
ggtgaaaacattgtgaaggatgccgagaaatttaaggcaaatggtgggaatatcattatt
gccacacctggaaagttggagacaatgttggagaaacctcaaaatgggttaaatttggct
gcaagtgttagatcgttagaggtcctggttttagatgaggcagaccagttattagaccta
ggttttgaagccagcatcaatacaattctaagttatctaccaaaacagagaagaactggt
cttttctcggctacccaaactgatgaattagaaaacctaattagagctggattaagaaac
ccagtgcgggtcaatgtgaaggaaaagaagaaagatgatggcaaaatggaacagagaaca
ccctcaactttacaaaacttttatatgatagtcgaaagtgatcagaaattcaaccagatg
atgaatttcattcaagctaggcggagagagaaaataatgatttttttcagcacatgcgca
ggggttgattatttctctaaaatgttacaacttatattgaaaaatactcaggtcctatgc
cttcatggaaaaatgaagaacaagagaaacaaagtgtttgccaaattcagagcattagaa
agtggaattctggtgtgtagtgatgtgatggctcgaggagtagacattccagagattaac
tgggtaattcaatacgatccccccaaattggccaacttttttgtccatcggtgtggccgc
acagccagaataggaaacacagggaatgctttagtgtttctgctgcctgcagaggacaca
tacttaaattttttgaaaatcaatcagagagttgtgttacagaagctggattcttgtgac
agtgtaaataattacttaccaaaactccgcaagtttgcccttaaagacagggcactgatg
gaaaagggagcaaaggcttttgtgtcatttgtgcaattttatggcaaacatgagtgtgga
cttattttccgaattaaagatttggactttggtaaacttgccaatggatatggactttta
cgcattcctaagatgccagaaatcaaaggaaaggatgtatcaaactttgttccagtggag
actgattttaacaacattgcatacaaagataaacacagagaaaaacaaagacaagaaaag
cttcagtctgaagagcccaaaacatccaaattccgtcgacctcccaggtcacaaccatgg
tccaaacagaaagagagaaaagagcggaagaagaagagaagagagcagaaggagatctcc
aggaagaggaaagccgaggacagggagactgtaggcaatgaagaggaagaggactttcaa
gaggatgtcaaacttctaaagaaacttaaaagaggaaaaatctctaaggaggagtttgac
agccagtttgctccttcagatgatgatgactaa
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