Crassostrea virginica (eastern oyster): 111128424
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Entry
111128424 CDS
T09197
Name
(RefSeq) vitamin D3 receptor-like isoform X1
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111128424
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111128424
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111128424
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1D. Rev-Erb
111128424
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HEPN_RiboL-PSP
Motif
Other DBs
NCBI-GeneID:
111128424
NCBI-ProteinID:
XP_022329728
UniProt:
A0A8B8DQ95
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Position
4:4787288..4791901
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AA seq
461 aa
AA seq
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MNPGQGKRKGRKREKYTTEHVPLEFPSCLVCGKDSTGIHFGVYSCEACKTFFRRSLLRQT
PYKCDKNDNCPIDAGIQKGARSCPACRLQKCVDCGMSKDGVRQGRYTMTQRTNVILEVQK
LRESGSALLRETVQNDEQLLSEQSRTSTKISSSGSSSNSSIQDKEILDLSKDIQRTSIML
GDEESAVSCDLSSPDNPSDVLRSIMTAYGYLEHFTKFLTDREIRDLLEDGKSKYVDKTNL
FGKLDYLPKEQYNDFYEKTQIDVDGRKKLLSEGKYEFMKMANDLVKFSKNIPFFCDLDIE
DQKALLKGSHFEFFTILLHRSMDLDTEMCISYTGKVLSLDEACPYTDKQTMLRWAEFSRD
VCKLCLSPEELALVLGICITFRDRCELNQPDIVESIQKRLLDTLEYTIQNAYHFEKGMRL
AKIMDIFVRLRVIGDEYLKLYKVICNDPCMQENLPEFLIFS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggggcaaggaaaacgcaaaggccggaaacgggagaaatacacgaccgaacac
gtgccgctggagtttccgtcgtgcctggtgtgtggaaaggactccacgggaatccacttt
ggagtgtacagttgtgaggcgtgtaagactttcttccgccggagtctcctgagacaaacc
ccatacaaatgcgacaagaacgacaactgtcctattgacgcgggaatacagaagggagca
aggtcgtgccccgcctgtcgtctgcagaagtgtgtcgattgcggaatgtctaaagatggt
gtacgacaaggtcgatacacaatgacacaaaggacaaatgttatactggaggttcagaaa
ctgcgcgagtcagggtctgctttgttgagagagactgtacaaaatgatgaacaattgtta
tcagaacaatcaaggacctctacaaaaatcagttcgtcgggttcatcatccaattcatcc
atacaagataaagaaatcctggacctttccaaagacatacagcgaacttctataatgctg
ggtgatgaagaatcagcggtatcgtgtgacctctctagtcctgacaatccaagcgatgta
cttcgcagtatcatgacagcatacgggtatctggaacacttcacaaaatttctgacggac
agagaaattcgtgatttattagaagacggaaagtcaaaatatgtggataaaacaaactta
tttggaaaattggattaccttcccaaagagcagtacaacgacttttacgaaaaaacacag
atagatgtagacggcagaaagaagctgctctccgaagggaaatacgaattcatgaaaatg
gcgaacgatttagtgaaatttagcaagaacattccgttcttctgtgatctcgatatagaa
gaccagaaagcattattaaaaggttcccattttgaatttttcacaattttgctacataga
agcatggatttggacacggaaatgtgtatttcatacacggggaaggtactttcgctggac
gaagcgtgtccctacacagacaagcaaaccatgttacgttgggcggaattttcacgggac
gtttgcaaactttgcctcagtccagaggaacttgctctggtactgggtatttgcattact
ttcagagacaggtgcgaacttaaccagccagatattgtggagagcattcagaaaagactt
ttggacacactagagtatacaatacaaaacgcttatcattttgagaaagggatgcgttta
gctaaaataatggacatatttgtgcgcctgcgcgtgattggagatgagtatttgaaactg
tacaaggtcatatgcaatgacccgtgtatgcaagagaatcttcctgagttcctgattttt
tcatag
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