KEGG   Crassostrea virginica (eastern oyster): 111128429
Entry
111128429         CDS       T09197                                 
Name
(RefSeq) paired box protein Pax-9-like
  KO
K15608  paired box protein 2
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvn03000]
    111128429
   04131 Membrane trafficking [BR:cvn04131]
    111128429
   03036 Chromosome and associated proteins [BR:cvn03036]
    111128429
Transcription factors [BR:cvn03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    111128429
Membrane trafficking [BR:cvn04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    111128429
Chromosome and associated proteins [BR:cvn03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    111128429
SSDB
Motif
Pfam: PAX HTH_23 HTH_32 HTH_Tnp_IS1 HTH_Tnp_Tc3_1 HTH_28
Other DBs
NCBI-GeneID: 111128429
NCBI-ProteinID: XP_022329737
UniProt: A0A8B8DNH9
LinkDB
Position
4:52565430..52566734
AA seq 433 aa
MGGSYVNGKALPESVRKQIIEMSLNNIRACDIAKQLKVSHGCVSKLLKKYRNTGSYKAGS
TGGSKPKVAVPEVVDIIMRYKEENPTMFSWEIRDRLIKERRCTKLNVPSISSINRIIRSK
TSESTRRSSLGSSCSPSSSENSISPPISANKRSPFGYSINDILGQQSTSENLNLTSTPIL
PQSGKRKFSEIDDGDLLAVAAKSARLIEEEVTLKAASPAPTANCTLPSVRTPCATDLCKD
LGSLLDMLPWVPSQVSSLKNNSNFDDSFTSLVGPGKGPVLHESQATSTNRGRYQNENVTP
YQQAGEIQQNSLPNPSLSHYHPQESCYPQQKPHPVVPRPVQSVMTSSGPVSNATAAPAFS
TSFSSLPPCSQTLTTGLSPYSYPSYPPPAFTHMPHQKHVYPAVSLSSGLQTPNYQYHAPS
YNGYTSTALPYYY
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgggcggttcttacgtcaatggcaaagctcttccagagtctgtgcgaaaacagatcata
gaaatgtcgttaaacaacatacgcgcctgcgatatcgccaaacaactgaaagtttcgcat
ggctgtgtgagcaaactgttaaagaaatacaggaacacaggatcatacaaagcaggctcc
acgggcggatccaaacccaaggtagctgtacccgaagtggtggatataattatgagatac
aaggaagaaaaccctactatgttttcttgggaaattcgcgacagattgatcaaagaaagg
agatgcacgaaattgaatgtgcctagtatcagctcaatcaacagaatcatacgaagcaaa
acttccgaaagcacgaggaggtcttctcttggatctagctgctccccatcgtcatccgag
aactcgatcagcccacccatctcagctaataaacgctcacccttcggatacagcatcaac
gatatattgggtcaacagagcacgtcggaaaacttaaacttaacatcaacccctatattg
ccccaatctggaaagaggaagttcagcgagattgatgacggtgacttattggcggtggct
gctaagtcggcacgacttattgaggaggaagtcactttaaaagcagcatcgccagcaccc
accgctaattgtactctgccctcagtccgcaccccctgcgccacagatctctgcaaggac
ctcggttcgcttcttgacatgctgccatgggtaccttcgcaagtttcctcactgaagaat
aattctaattttgatgactccttcacctcgcttgtcggccctggtaagggtccagttttg
cacgaaagtcaagctacatctaccaacagagggcgttatcagaacgaaaatgtgacaccc
taccaacaggccggtgaaatccaacagaacagcttgcctaatccctctttgtcacactat
cacccccaggagagctgttacccccaacaaaagccacaccccgtagttccaagaccagtg
cagtcggtcatgacttccagtggcccagtatccaatgcaacagccgcccctgcattctcg
acctcttttagctccctacccccttgcagccagaccctgaccacaggactatccccctac
agttacccaagctaccctcccccagcattcacccacatgccacatcagaaacatgtctac
ccagcagttagcctgtcctcgggattgcaaactcccaattaccaataccacgctccgtct
tacaatggctacacttccacagccttgccgtactattactag

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