Crassostrea virginica (eastern oyster): 111128622
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Entry
111128622 CDS
T09197
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111128622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111128622
Enzymes [BR:
cvn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111128622
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111128622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
DUF6252
Motif
Other DBs
NCBI-GeneID:
111128622
NCBI-ProteinID:
XP_022330063
UniProt:
A0A8B8DQX0
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Position
4:complement(58979191..58985514)
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AA seq
520 aa
AA seq
DB search
MPEGPELHLASQFVNLVSKGRIFRGPIFKSAVSKHAEVEFDGDFTISAMSRGKELKLTLA
STGADKKPRAKGQTMDIVFQFGMSGRFDFYEATELKKHAHLNFFTRDEPRMVLSYVDFRR
FGKWQVGGSWSEDRGPCVLFEYQDFRKNVLDNVSKPIFNKPICEFLLNQKYFNGIGNYLR
AEILYRAGIPPFVSARSVLEPLAEEATENGVSENVKVKSKKVTENGVSSKVKVKSEKVTE
NGVSKKLKIKTEGPDILQLCHILPQEVIKLGVTGYDPEGRDPDYSKFMEWLQCYYQPGMT
NMADHNKRTIWYHGNPGPMVPKDIKTRKIKRSSKQVKSKSKKIKKETEDSDEEDGSAALT
RGKLQEAEQKPARKTSKKSSARSSSNASSSSSTKSLKSSAQSSKLSLKASEKSTVRSTEN
SSKRSLKRSAEKSSLNSSDTLESLKVAPKGTKRRKSETSIKPVTVRSVQTRRKVKEEAER
DESVVNDRGKARGRGQQVKAGSGGRRKMSASAQNRKRRTR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggtcctgaattgcatcttgccagtcagtttgttaatcttgtctcaaaagga
cgaattttcaggggtccaattttcaagtcggcggtgagtaaacatgcagaggtggagttt
gacggcgacttcaccatttcggcaatgtccaggggcaaagaactgaagctcaccctggca
tctacgggtgctgataagaaaccccgcgccaagggccaaaccatggacattgtttttcaa
tttggcatgtcaggaaggttcgatttctacgaggctacagaactaaagaaacacgctcac
cttaatttcttcaccagggatgaaccgcggatggtgctgagttatgtggacttcaggagg
ttcgggaaatggcaggtggggggatcgtggtccgaggacaggggtccgtgtgtattgttt
gaatatcaggatttcaggaagaatgttttggacaatgtcagcaagccaatattcaataaa
ccaatctgtgaatttcttctgaatcagaagtatttcaatggaatagggaactatcttaga
gcagagatactgtacagggcaggaatacccccttttgtttcggctaggtctgtccttgaa
cctctggcggaggaagcaacagagaatggggtcagtgaaaatgtcaaggtcaaatccaag
aaagtaacagagaatggtgtcagcagtaaggtcaaggtcaaatcagaaaaagtgacagag
aatggggtcagcaaaaagttgaaaatcaagacagaggggcctgatattctacaactgtgt
cacatactgcctcaggaagtcatcaagcttggggtcacagggtatgatcccgaaggcagg
gatccggactactccaagttcatggagtggctccaatgttactatcaaccaggcatgacc
aacatggcagatcacaacaaaaggacaatatggtaccatggcaacccaggtccaatggtg
cccaaagatatcaaaacacgaaagattaagaggagttccaagcaagtcaagtcaaaatca
aagaaaataaagaaagaaacagaagacagtgatgaagaggatggatctgcagccttaacc
agagggaaactccaggaagcagaacagaagcctgccagaaagacatccaaaaaatcatct
gcaaggtcatcatcaaacgcatcttcatcgtcatctacaaagtcattaaagtcatcagca
cagtcttcaaagttatctttgaaagcatctgaaaagtcaactgttagatctacagaaaat
tcatcaaaaaggtcattgaaaaggtcagcagaaaaatcatcgttaaattcatctgataca
ttggaatcattgaaagtcgcacctaaaggtacgaagagaagaaagagtgagacttcaatt
aagccagtgactgttagatctgttcagaccaggaggaaagtaaaggaagaggcggagaga
gatgagagtgtcgtcaatgataggggaaaagccagaggacggggtcagcaggtgaaggca
ggaagtggtggaaggaggaagatgtcggcatcagcccaaaaccggaagagacggacacgc
tga
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