Crassostrea virginica (eastern oyster): 111128721
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Entry
111128721 CDS
T09197
Name
(RefSeq) DAZ-associated protein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111128721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111128721
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111128721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111128721
NCBI-ProteinID:
XP_022330216
UniProt:
A0A8B8DTA0
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All DBs
Position
4:13004793..13014527
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AA seq
550 aa
AA seq
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MHRGFNKNSNNNQRNEAGKLFIGGLSWDTDQDSLLNYFSQYGEVIDCVVMKNQQTGKSRG
FGFVTFNDAQCVDTVLSAAPHSIDGRQVDAKPCNPKAANKGPKDGGGRGHREGGGGGGGG
GGDKDKKIFMGGLPNVDEDFLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFESEDAVD
QVCAEHFININGKQVECKRAEPRDGRDNKQGGYGGRRGHGQDMMGPPHGMDGGWNQGGGN
WNQGPPPHGGPPPPGPGPMGNMGFPPQGPGGYQQQQPLPGQGFPPQQGPPPQQNYQGYQS
PPGYQQGGWGGQPPNASPGQQGAWPPPSAAPPQAVPPPADAQQSYAGYTSPQGGYSQQPP
TTAYSQWGATASSPVAPQPAAAQPPAQQPAQPTYSPYGQPPAAAAAPATPGYTPAPGAQS
YSSHYNVAVADPAQPATPTTAQAGYSTYNPYGAPQTAASTLPDPYAPTTQPATAPGAQVS
MGVPDLYAQPPVAQPPAAPGYGDPPGFGVAPQPAAGYGGQGDGQAYAAQPGGGYQRPSVS
SGQSYHPYRR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtggattcaacaaaaattcgaataataatcaaaggaatgaagcagggaaactg
tttattggtggattaagctgggatactgatcaagattccctgctgaattacttcagtcag
tatggagaggtcattgactgcgttgtgatgaagaatcaacagactggaaaatcccgtggg
tttggatttgtcaccttcaatgatgcacagtgtgtagatacagtgttatctgcagcgccc
catagcattgatggcagacaggtcgacgccaaaccctgcaatccaaaggcagctaacaag
gggccaaaggatgggggtggaagagggcacagagaaggaggtgggggaggaggaggagga
ggcggagacaaagacaagaagatcttcatgggaggtctacccaatgtggatgaagacttc
cttaggaatttctttgggaagtatggaaaggttttggatgtcaatatcatgattgatcaa
caaaataaaaagtctagaggcttcggatttttgaccttcgagtcagaagatgcagtagat
caagtttgtgcagaacattttataaacatcaatggaaaacaggtggagtgtaagcgtgca
gagccacgagatggacgagacaacaagcaagggggatatgggggtcgcagaggccatgga
caggacatgatgggtccccctcatggaatggatggaggttggaaccagggaggaggaaac
tggaaccagggtcctccccctcatggtggtccccctcctccaggaccgggccccatgggg
aacatgggattccctccccaagggcctggaggataccaacaacagcagcccctgccagga
cagggatttcctccccagcaaggaccccctccacagcagaattaccaagggtaccaatct
ccccctggataccagcaaggtggatggggtggacaaccccctaatgcatcaccagggcaa
caaggtgcctggccacccccatccgctgctcctccccaggcagtgccccctcctgcagat
gcccaacagtcttatgctggatatacatctccacaaggaggctacagccagcagcccccc
accacagcctactctcagtggggagccacagccagttcccctgtggcccctcagcctgct
gcagcccagccccctgcccagcagcccgcccaacccacctatagcccttacggacaacca
ccagctgcagctgctgctcctgctacacccggttacaccccagcccctggggcacagtct
tacagttcacattacaatgtagctgttgctgatccagctcagcctgccacacccacaact
gcccaggcagggtacagtacatataacccttatggagccccccagacagctgcctccact
ctgccagacccttacgctcccacaacacagccagccacagcaccaggagctcaggtttct
atgggagttcccgacctttatgcccaacctcctgttgcccaaccacccgccgcccctggt
tatggagatccacctggtttcggcgtggcccctcaacccgcggcaggctatggaggtcaa
ggtgatggtcaggcatacgctgcccagccgggaggagggtaccagaggccgtcggtcagc
tccgggcagtcttaccacccctacaggagatag
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