Crassostrea virginica (eastern oyster): 111128896
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Entry
111128896 CDS
T09197
Name
(RefSeq) nucleolar protein 6-like isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111128896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111128896
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111128896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap
Nrap_D3
Nrap_D4
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
111128896
NCBI-ProteinID:
XP_022330549
UniProt:
A0A8B8DSM5
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Position
4:599241..616670
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AA seq
1169 aa
AA seq
DB search
MKRKQAPVVIDERTEDHDEQSESEESLSENSDAESSHDSEANGGHSASVPPGKKVKIMKR
DLYRPPTNDELNQLKETQNLFHSSLFRLQVNELLTEIQLKEKRNQQINEAVLAVSQMIKS
LKKSMEHELQSQKWLKNIRVPIHQNPRAVKGRFQFVPPREIVTAGSYVTGTCIKPSVTVD
LVLVMPLECFQDKDFMNHRYLRKRAIYLAVIAKRLREVQGIQDLKYTYQNGNSLKPSLLL
SYQGSGSRTVCLNITAVPEEGTFKLNRFHINKSNVRRQWFLEEEEGKSSTDKVMPTPFYN
NTVLQDLTLTQNMEFLQRTLGNNTNIRDGISLLKVWLRQRELTQGFGGFSGFLISMFVAY
LISQRKINPLMSSYQVMRNVLLHLAQTDWTKDPLTLCPSFDPFQQPDPCLFYEHFSIVFV
DVTGFVNLCSDLSKGLYDRVRQEADLAVHFLEDRSVDSFSALFMTPVEFLRKFDVTLHLQ
DLSRKEVEELGLLDKYVDHGGDYIPAMKPDLLSLLCRGLGGRASLVQYRQLPVPQWDVES
LPPSHESLGSVVVGLQLNPESAFSVLDKGPPADSPEAKEFREFWGDKSELRRFKDGSVCE
AVPWTKKSLLSEKRSVCCRVVQHVLQRHVGISPEAVKCFSDQLDPLLQCSVNNNLGERYG
TGEEQHNDVIQKYDELCKLLRNLKELPLSINSIQGSAPVFRYSEVFPPLPAMCSKDHKVG
KGGRDTPQNYPKGCPDFNMSLKVICLLEGSGKWPDEKKPFNRLMAAFHIQLGESIKTQYG
LPVSVYPRHIDVVKDNYVFRVTLGYTREIALTKMVRTPEGMVKYKDNEEALNLEREIQAL
PRLTSTLHGLQQLHASFSSTVRLAKRWMAAQLLSEYVCDEAVEIITAYLYLHPAPYTPPS
TPLVGFQRFLYLVGHHDWMNSPLMVNLNEEFTAEDLEEIRARFQRERSSRALLFLSTPFD
KHSSYWTRHWPTAPILQRLVVLARGSHSLLHSLIQAGAENSDFKQLFRPPLEMYDLIIHL
TWKQLPRQHEAVDWEGDHLPLNRKKSVLSTSDPANTLQHFPVYDYDPASLYLNELKEMYG
DFALFFYDKYGGKYIAVLWKPTAFTPKDFKVSHLAGRTVKTTDSGEGDITVVPNVEAIID
DFRILGRGLVSNIQIQRKAHLPSDTTHNA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaacaggctcctgttgtaattgatgagaggacagaggatcatgacgaacaa
tctgagtcagaagaaagtttatcagaaaacagtgatgctgaaagctcacatgactctgaa
gcaaatggtggccactctgccagtgtgcctcctggtaaaaaggttaaaatcatgaaaagg
gacctctaccgaccccccaccaatgatgaactaaatcagctgaaggaaacccagaatctc
ttccactcaagtctctttaggcttcaggtgaatgagttgctgactgagatacagctgaag
gagaaacggaaccagcagatcaacgaggcagtgttagctgtgtcacagatgatcaagtca
ctcaaaaagagtatggagcatgagttacagtcccaaaaatggctgaagaacatccgagtc
cccattcaccagaacccaagagcagtgaaggggaggttccagtttgtgccccccagagag
attgtgacagcagggagctacgtgacagggacgtgtatcaaacccagcgtgactgtcgat
ctggtcctagtcatgccactggagtgctttcaggacaaagactttatgaaccaccgttat
ttgaggaagagagcaatttatttagcggtgatcgccaaacgattacgtgaggttcaggga
atacaagatctgaagtatacttaccagaatggcaactcactgaaaccgagtctcttgctc
agttaccaaggcagtgggagccgcacagtctgtctgaacatcaccgctgttccagaggag
gggacattcaaactgaaccgattccacattaacaagagtaatgtccgcaggcaatggttc
ctggaagaggaggaaggcaaatctagtacagacaaggtgatgcccactccgttctacaac
aacactgtccttcaggatttgaccttgacacagaacatggaatttttacagaggacgctg
ggaaacaacaccaatatccgtgacggaatttccctcctcaaagtctggctacgacagagg
gagcttactcagggttttggggggttctctggattcctgatatccatgtttgtggcttat
ttaatcagccagcgtaagatcaatcccctgatgagcagctaccaggtgatgaggaatgtt
ctcctacatctagcccagacggactggacaaaggaccccctgacactgtgtccttcattc
gatcctttccaacagccggacccctgcttgttttacgaacacttcagcatcgttttcgta
gacgtcactggattcgttaacctgtgttctgatctcagtaaaggactgtacgatagggtg
cgtcaggaagcagacctggctgttcacttcctggaggaccggtctgttgacagtttctct
gccctgtttatgaccccagtggaattcctcaggaagtttgatgtcacattgcatctgcag
gatttatccaggaaagaggtggaggagcttggattgttggataaatacgtggaccatggg
ggcgactatatccctgccatgaagccagacctcttgtccctgctctgtcgtggtctaggg
ggcagggcctccttagtacagtatagacagctcccagtgcctcagtgggatgtggaaagc
ctaccccccagtcatgagtccctagggtcagtcgtagttggactacagttgaacccggag
tcggccttcagtgtgctggacaagggacccccagcagactctcctgaggctaaagagttt
agggagttctggggtgacaagtcggagcttcgtcgatttaaggacggcagcgtatgcgaa
gctgttccatggaccaagaaatccttgctgtcagaaaaacgcagcgtgtgttgtcgagtg
gttcaacacgtactccagagacatgttggaatcagtcccgaggcggtgaaatgttttagt
gatcagttagacccattgttacaatgttcagtgaacaataacctgggagagaggtacgga
acaggggaggagcagcataacgatgtgattcagaagtatgatgagctgtgtaaactcctg
aggaacctcaaggagctgcccttgtccatcaactccatacagggctcagccccagtgttc
agatactcagaggttttccccccattaccagccatgtgtagtaaggatcataaggtgggg
aaagggggtcgggacacaccccagaattaccccaagggctgcccggacttcaacatgtcc
ctcaaagtgatctgtttgctggagggtagtgggaaatggccggacgagaagaagccgttt
aacagattaatggcagccttccacattcagctaggggagtcaatcaagacccagtatgga
ttacctgtgtctgtgtatcctcgacacatagatgtcgtcaaggataactatgtgtttcgc
gtcaccctgggctacacccgtgagatcgccctcactaagatggtcaggacaccagaggga
atggtcaagtacaaagacaatgaggaagctttgaacctggagcgagagattcaggctctt
ccccgcttgaccagcacgctacacggacttcaacaattgcatgcctcatttagttccaca
gtgaggctggccaagcggtggatggctgcccagctcctgtctgagtatgtgtgcgatgag
gctgtggagatcattacagcctacctgtatctccaccccgcaccctacacacctcccagt
acccccttggtcggttttcagcggttcctgtacctagtgggtcaccatgactggatgaac
agccctctgatggtcaacctcaatgaggagttcacagctgaggacttggaggagattcgg
gctcggttccagagggagcgttcctcgcgcgccctcctgttcctgtctacaccatttgac
aaacacagctcctattggacgagacactggcccactgcgccgattctacagagactggtt
gtcctagcacggggctctcattccctactacacagcctgatacaagcaggagcagagaac
tccgacttcaagcaattgttccgacctcctttagaaatgtatgaccttattatacacttg
acatggaaacagttgccacggcaacatgaagcggttgactgggagggcgatcatcttcca
ttgaatagaaagaagtctgttctgtcaacctctgaccctgccaacactctccagcacttt
ccagtgtacgactacgaccctgcctctctgtacctcaatgaactcaaggagatgtatgga
gatttcgccctgttcttctatgacaaatatggagggaagtacatagcagtgttatggaaa
ccaacagccttcaccccaaaagatttcaaggtgtcccatttagcagggaggacagttaaa
accacagattctggtgaaggagacattactgtggtgcctaatgtggaggccattattgat
gactttagaattctgggaagaggactggtgtctaacatacaaatacaacgcaaagcacat
cttccaagtgacactacacataacgcatag
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