Crassostrea virginica (eastern oyster): 111128926
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Entry
111128926 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
cvn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111128926
04120 Ubiquitin mediated proteolysis
111128926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111128926
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111128926
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111128926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
Prok-RING_4
zf-HC5HC2H
zf-Nse
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
111128926
NCBI-ProteinID:
XP_022330596
UniProt:
A0A8B8DUC5
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Position
4:complement(14287804..14293594)
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AA seq
608 aa
AA seq
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MKTLLVIGFSVVLSGAVIGNAYYQKKQFYPSVVYITKSNPSMAMLYIQAFVMVILMWRLM
RKVFFGSLRPAEIEHLIERSWYAVTETCLAFTVFRDDFSPKFVALFTLLLFLKCFHWLAE
DRIDYMERSPVISILFHIRALTLIALLGVLDLYFINHAYHSTLTKGASVQLVFGFEYAIL
MTIVAMTMMKYILHSIDLQNENPWENKAVYLLYTELFLGGVKVVLYMAFMVIMIKVHTFP
LFAIRPMYLSMRGFKKALHDVIMSRRAIRNMNIFYPDATEEELQADDVCIICRESMTTAA
KKLPCNHIFHTSCLRSWFQRQQTCPTCRRDVLRTVPIPTQTTPPPPPPQPAQPQPPQNMF
GGMAGIPGVPPQMWPQPPVPPQQPNPTQPGTQAPPQATTSTATVSSTFTQPSASTSTTTA
FPGMPTTGLAGLPTGMPPMMPMVPPLMMPFGMPRPPSNLSELSTEDLRRIEGQERENVEA
RIQWLRDIQALMDGAMVMINQYNTVAAQLSTPKINTNVPSTNGSQEAAPNKGNTEPKTEV
KAEQADLDFNYDGLEGATGFTPPKDEVMPEWNDPAREEHEDEMHEIRRRRLQKFAQEQNN
TQTSDTSS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgttactggttattggctttagtgttgtgttgagcggggcagtgattggaaat
gcatactatcagaagaaacagttttatccgtctgttgtgtacatcacgaagtccaaccca
agcatggcgatgctgtacatccaggcctttgtgatggtgattcttatgtggagactgatg
aggaaggtgttctttggtagccttcgtccggcagaaatagagcatctcatagagcggtca
tggtatgcagtgactgaaacctgtctggcttttacagtatttcgtgatgacttcagtcca
aaatttgttgcgcttttcacacttttgttgtttctcaagtgtttccattggcttgcggag
gacaggattgattatatggagagaagtccggtgatatcaattttattccacatcagggca
ttaaccctaattgcattattgggagtgttggatctctattttatcaatcatgcataccac
agtaccctgaccaaaggggcatctgtgcaactagtgtttggatttgagtatgcaattttg
atgaccattgtggccatgacgatgatgaagtacatcctccactctattgatctacagaat
gaaaacccttgggagaacaaggcagtttatctgttgtatacagagcttttcctaggtggt
gtgaaggttgtgttatacatggcatttatggtaataatgatcaaagtccacacattccct
ctctttgccatcagacccatgtatctctccatgaggggattcaagaaagctttacatgat
gtcatcatgtctcgaagagcaatcagaaatatgaatatcttctaccctgatgccacagag
gaagaacttcaggccgacgatgtgtgcatcatctgtcgtgaaagtatgacgacagcagcc
aaaaagttgccgtgtaatcacatcttccacaccagctgtctgaggtcctggttccaaaga
cagcagacctgtccaacgtgtaggcgggacgtactaaggactgtccccataccaacgcag
acaacgcccccgcctccccctcctcagcccgcacagcctcagccccctcaaaacatgttt
ggagggatggctggtatacctggagtccccccacagatgtggccccagccccctgtccct
ccccagcaaccaaatccaacacagccaggtacacaggcaccaccacaggccaccacgtca
actgccacggtgtcctccacatttactcagccctcggcatccacgtctaccaccacggca
ttccctggcatgcctaccacgggactggcaggcctgccgacaggaatgcccccaatgatg
ccaatggttcctcctcttatgatgccatttggcatgccccgcccaccctccaatctgtct
gagctgtcgacagaggacctacgtaggattgagggacaggagagggagaatgtggaggcg
aggatacagtggctgagggacatccaggccctaatggatggagccatggtgatgatcaac
cagtacaacacggtcgccgctcagctcagcacccctaaaattaatacaaatgttccctca
acaaatggcagtcaggaagcagcacctaacaaaggaaatactgaaccaaaaacagaagtt
aaggcagaacaagctgacttagacttcaactatgatggtttagagggagctacggggttc
acacccccaaaagacgaagtgatgccagagtggaacgatccagccagagaggaacacgaa
gatgaaatgcatgaaatccgacgacggagattacaaaagtttgcccaagaacaaaataac
acccagacatcggacaccagcagctaa
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