Crassostrea virginica (eastern oyster): 111128962
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Entry
111128962 CDS
T09197
Name
(RefSeq) interferon regulatory factor 2-binding protein-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111128962
04121 Ubiquitin system [BR:
cvn04121
]
111128962
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
111128962
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Atypical E3
111128962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
111128962
NCBI-ProteinID:
XP_022330646
UniProt:
A0A8B8DUH1
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All DBs
Position
4:41683377..41686251
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AA seq
601 aa
AA seq
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MSMPHRTQRQQCYLCDLPRMPWAMLHDFSEPVCRGCVNYEGADRIEMVLESARSMKRSHG
FHESRQSMKPHGLPPQRTAIDQHGSLDHPRAPPLERYDSRSRNLMTDYSSAQQNHSNGVV
PGRVEEQMPEHHRGSNMPMSSARAVSAVFPIHHLPDHSARFCAHPQGRPGYVPNPSVAPM
GGHSLQHTKKRSADHDDDETTGSHHEDNIFKFTLPEDMAKRPQIVRETIAALSSAVPFEI
RFKKDYHFIGRVFAFDSTSKNGVDFELKVFMEYPLGSGKIYNSASSVVKQMHVDSMKDVG
KGLSSGYKYLEYEMKHNSNDWKVLSELLSETVRFFKESVKPEIIPSPYHNPSLPPLPTPN
TRPHVPLAHTRSQGSHGSFDGQSKKRKASPEPDNDFGEQRKRQQWIQNQSEALKMTMNST
GYASAGSSSTSPSSNHTPTPPEGANMNGPSPMAALMNVTDNITSGPISQNRNSQASPSGP
QAGPSVARRGPPMSITECAPSSLLETNVQNAETLKCTICHERLEDTHFVQCPSVSEHKFC
FPCSRNSIKIQGAGAEVYCPSGKKCPLVGSNVPWAFMQGEIATILGGDVRPDMNIKKERD
T
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcctcaccgtactcagagacagcagtgctacctgtgcgacctgccccgcatg
ccatgggctatgctgcacgacttctctgagccggtatgtcgggggtgtgtcaactacgaa
ggggcagacaggatagaaatggtactggagagtgcacggagtatgaaaaggtcacacggg
ttccacgaaagccgccagtctatgaaaccccacggactgccgccccagagaactgccatc
gaccagcacggctccctagaccaccctcgtgccccacccctggagcggtacgacagccgc
tcgagaaacttgatgacggactacagctctgctcaacagaaccattccaatggagtggtg
ccgggaagagtcgaggaacagatgccagagcaccaccgtggatccaacatgcctatgtcg
tctgctcgagctgtttcagcggtgtttcctatccaccatcttcccgatcacagtgctagg
ttttgcgcccatccgcagggtcgacccggatacgtaccaaaccccagtgtcgctccgatg
ggtggccacagtttgcagcatacaaagaaacgtagtgctgaccatgatgatgatgaaact
actggcagtcatcatgaagacaacatctttaaattcacgttgccagaagacatggcgaaa
cggcctcaaattgtccgcgaaacaattgcagcattgtcgtctgctgttccttttgaaatc
cggtttaagaaggactatcacttcattggtcgtgtttttgcatttgactcaacatctaag
aatggtgtcgattttgaattaaaggtttttatggaatacccgcttggttcaggtaaaatt
tacaacagtgcttctagtgttgtaaaacaaatgcatgttgacagtatgaaagatgtgggc
aaaggcctttcgtccggttacaagtatttggagtatgagatgaagcataattcaaatgat
tggaaagttttaagtgaactattgtcagaaactgtgaggtttttcaaagagtccgtgaaa
cctgagataattccatctccgtatcataaccctagcctaccccctttaccaacgcctaac
acaagaccacatgtgcctttggcgcatacacggagtcaaggctctcatgggtcgttcgac
ggtcagtcgaaaaagagaaaggcgtcacccgaacctgataatgattttggggagcagagg
aaacgccagcagtggatacagaaccagtccgaggcgctcaaaatgacaatgaattccaca
gggtacgcttcagctggttcctcatccacctccccatccagtaaccacacgcctacccca
ccagagggcgccaatatgaacggcccctcgccaatggcagccttgatgaacgtcacggac
aacattacttccggtccaatctcgcagaaccggaactctcaagcgtccccgagtggtcca
caggctggcccttccgtggcaagacgagggcctccaatgtccatcacagaatgtgcgcca
tcttctcttttggaaactaatgtacaaaacgcggagaccttgaaatgcacgatttgccac
gagcgtctggaggatacacattttgtacagtgtccgtctgtcagtgagcacaagttctgt
ttcccgtgctctaggaatagcatcaagatccaaggggcaggagcagaggtatactgtccc
agcggcaaaaagtgtccactggtgggttctaacgtcccgtgggctttcatgcagggtgaa
atagcgacgattttagggggtgatgtcagaccagatatgaacattaaaaaagagcgagac
acctga
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