Crassostrea virginica (eastern oyster): 111129019
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Entry
111129019 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: suppressor of cytokine signaling 5-like
KO
K04698
suppressor of cytokine signaling 5
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111129019
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
111129019
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS_box
Ig_CFAP65_4th
Motif
Other DBs
NCBI-GeneID:
111129019
NCBI-ProteinID:
XP_022330773
UniProt:
A0A8B8DT16
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Position
4:complement(45420737..45433504)
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AA seq
425 aa
AA seq
DB search
MSNDEEFAGNSAEKLLPSNASPSENPRRGMPINLGGHRLHRSSVRPFFCCGSQLSLNSIT
DFIQTSDQSDCDDGSDLMANLSLSKKTQNRHKKTNEGRKKFWTLKLKGKLHVPKRSSFNA
NESDSSGSIVCTSFRKSSDESESGIEQTGASATAQPQEVFVTLRPINFDELYPTEDIDQR
RIRQRAREMEEGIDVQDACILIPQSGDSSSDEEYDCPQPLQHRNSFSSFSDPWQYGSFSM
LPTHSNMPLPVRPHSQVDYIHCLXPDIASITNCSYYYGVMDRYQAEKLLDKKPEGTFLLR
DSAQEEYLFSVSFRRYGRSLHARIEQWNHKFSFDSHDPGVFASDTVCGLIEHYKDASVCM
FFEPLLTIPLHRTFPFSLQHLSRSIICDRISYDDINLLPLPRQLRDYMRYYHYRQKIRTR
RFDMT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgatgaagagtttgctgggaacagtgctgaaaaactgttgcccagcaatgct
tcccccagtgagaaccccaggaggggaatgccaatcaacctaggggggcacaggttgcac
aggtcctctgttcggccattcttctgttgcggcagccaactgtcattgaacagcataaca
gacttcatccagacatcagatcagtcagactgtgatgatgggtcagacctaatggcgaat
ctatccctctccaaaaagacacaaaacagacacaaaaaaaccaatgaaggacggaaaaag
ttctggactttgaaacttaagggaaagctacatgtaccaaagaggtcatcattcaatgca
aatgaaagtgattcttcaggaagcattgtctgtacgtcattcagaaagtcatcagatgaa
agtgaaagtggaattgaacagacaggtgccagtgcgacagcacaaccacaagaagtgttt
gtaactctacgccccattaactttgatgaactttatccgactgaagacatcgaccaaaga
cggattcgacagcgagctagagaaatggaggagggaatcgatgtacaagacgcttgtata
ttaataccacagtcaggggattcttcctctgatgaggagtatgattgtcctcagccactc
caacacaggaatagtttttcctcattttctgatccttggcagtatggatctttctccatg
ctacccacacattccaacatgccccttcctgtccgcccacattcccaagtggattacatc
cattgtcttngtcccgacattgcaagcattaccaactgtagttattactatggagtcatg
gatcgctatcaggctgagaaacttctagataaaaaaccagagggaacatttttgctgaga
gacagtgcccaagaagaatatttattttcagtgagctttcggcgttacggccgctcctta
catgctagaattgaacagtggaatcacaagttcagctttgattcccatgacccaggtgtg
tttgcatcggacacagtttgtgggcttatagaacactataaagatgccagtgtttgcatg
ttttttgaaccgctgcttaccatccccttgcatcgtacctttcctttcagtctccagcat
ctgagccgatcaattatatgtgatcgtatatcatatgatgacattaacctcttgcctctt
ccacggcagttgagagattacatgagatattaccactacagacagaagatccgcacacgt
agatttgacatgacttag
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