Crassostrea virginica (eastern oyster): 111129112
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Entry
111129112 CDS
T09197
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111129112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111129112
Spliceosome [BR:
cvn03041
]
Complex A
U1 snRNP components
U1 related factors
111129112
Complex B
111129112
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
111129112
NCBI-ProteinID:
XP_022330939
EnsemblRapid:
LOC111129112
UniProt:
A0A8B8DTT7
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All DBs
Position
4:complement(16655724..16666759)
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AA seq
781 aa
AA seq
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MSFPPRPPIGMPPVGYAYAPVGMMPMGLGMMPQPVMRPIVTTQSASIPPAKPFNRKLVPQ
EIPKDEKEEKPPVTTVFVGNISDRAPDAMIRQMLQEVKRWRKMPDCRRYPRCGNVLSWKR
VQGASGKLQAFGFCEYEDPEATLRCMRLLNEWEIAEKKLVVKVDAKTKTLLDEYINKKKS
KTGVVESEDKGKKENGDKEEGDTKVEEDLDEFTKREDRVAKAGLDAIMREYAEDLSKKMF
QDVEKEPKPVKKKVEEEKIIKDTGIDDIDIEDDKREIIHREIKSFRDLHKGEDEAEKDAE
KEKERRDREREERLKLVEERRRERERMKERERERELEKERYERERERIRSRTRSRSRSPR
RWRERSRSREKERRKERDRDAEDEEEAYERRKLEKKLREKEAAYQERLKNWEARERKKAR
EYEKEREREEERKAEESREGRRLKEFLEDYDDERDDVKYYKGSCLNRRLKEREKEREADA
RDRQREKEELEEIKRKLLDEGHPDPEAELMKIELEREEHLKPRLNISEERSPPVQPKEPI
RVDSSDEQEEEEEKPQLPPNMKSTLKPIDMSNSVTPMSEDNDSNFPPPDEDSQPVYGPSK
EENTKLGFGGLKLGSSGSPLESTSSKRKKLTVGDVFNQDDEDSSSGAKKRKLVPLDYDDD
KDGKKGATAEEKRLKIKQLIESIPTAKEELFAYSLDWNIVDQVLMDKRIKPWVNKKIIEY
IGEEEPTLTEFICQKVMARSGPQSILNDVAMVLDEEAEVFVVKMWRLLVYETEAKKLGLV
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcctccgagaccgcccataggcatgccgcctgtgggatatgcctatgcacct
gttggcatgatgcccatgggactaggaatgatgccacagccagttatgagaccaatagtg
actactcaaagtgcttctataccgccagccaaacccttcaacagaaagctagtcccgcaa
gaaatacccaaggacgagaaagaagagaaacctcctgtcaccacagtgtttgttgggaat
atcagtgacagagcccctgacgccatgatacgacaaatgttacaggaagtgaagagatgg
cgaaagatgccggactgccggagatatccgagatgtggtaacgtgctcagttggaaacgt
gttcagggagcatcaggaaaattacaggcctttggattttgtgaatatgaagacccagaa
gcaacattgcgttgtatgaggcttttgaatgaatgggaaatagctgagaaaaaattagtg
gttaaagttgatgccaaaacaaagactcttctggatgaatacattaataaaaagaaaagt
aaaactggtgtagttgagagtgaagataaagggaagaaagaaaatggagacaaagaagaa
ggtgacacaaaagtggaggaagacttggatgaattcacaaagcgagaggatcgggtggca
aaagccggtctcgacgccataatgagagagtatgctgaggacctctccaagaaaatgttc
caagatgttgaaaaggaaccaaaaccagtgaaaaagaaagttgaagaggaaaagattatt
aaagacacaggaattgatgacattgacatagaagatgacaaaagagaaatcattcataga
gaaatcaagagtttccgggatctccataaaggagaggatgaggccgaaaaagacgctgaa
aaggagaaagaaaggagagaccgcgagagagaagaaaggctaaagctggttgaggaaaga
cgtcgcgagagggaaagaatgaaagaaagagaaagggaaagagaactagagaaagaacgg
tatgaaagggaaagggaacgcatcagaagtaggacgaggtcaagatcaaggtcaccaagg
agatggagggaaaggtcaaggtctcgcgaaaaggaaagaaggaaagaacgtgacagagat
gctgaggacgaagaggaagcctatgaaaggagaaaacttgagaaaaaattgagagaaaaa
gaagcagcatatcaagagagattaaagaactgggaagcccgggaaagaaagaaggctaga
gagtatgagaaagaacgggagagggaggaggagaggaaagcagaggagtcaagagaagga
agaaggcttaaagagtttctagaggattatgatgatgagcgagatgacgtcaaatactac
aaaggcagctgtttgaacagaagactgaaagagagagaaaaggagagagaagctgatgcc
agggatagacagagggagaaagaagaactggaagaaatcaagagaaagttactggatgag
gggcacccagacccagaggcagaactaatgaagattgaactagagagggaagagcacctg
aaacctcgcctgaatatttcggaggaaagatcgccgccggtgcagccgaaggagccgatt
cgtgtggactcttctgatgaacaagaggaggaggaagaaaagccacagttaccccccaac
atgaagtccacactgaaaccaatcgacatgtccaacagcgtgacccccatgtctgaggac
aacgacagcaacttccctccccccgatgaagactcccaacctgtgtacgggccaagcaaa
gaagaaaacacgaaacttggttttggtggactgaaattagggagctctggaagcccattg
gagagcacctctagcaagagaaagaaactgacagtgggagatgtttttaaccaggatgat
gaagatagctcatcaggtgctaaaaaacgcaagcttgttcccctggattacgacgacgat
aaagacggcaagaaaggggcaacggctgaagagaagcgactgaagatcaagcagttgatt
gagagcattcccacggccaaggaggaactgttcgcctactcactggactggaacatcgta
gaccaggtccttatggataagagaatcaaaccctgggtcaacaagaagatcattgagtac
ataggagaggaggaaccaacactgacagagtttatatgtcagaaggtgatggctcgcagt
gggccccagtcaatactcaatgatgtagccatggtgctggatgaagaagccgaagttttt
gtggtgaagatgtggagattattagtgtatgaaacagaagccaaaaaactgggtctagtc
aaatga
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