Crassostrea virginica (eastern oyster): 111129301
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Entry
111129301 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111129301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111129301
Spliceosome [BR:
cvn03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
111129301
Complex B
111129301
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
111129301
NCBI-ProteinID:
XP_022331300
UniProt:
A0A8B8DTT5
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Position
1:complement(11031525..11064414)
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AA seq
411 aa
AA seq
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MTAFLPPNLLALFAARDPIQYLPPATKLGFEKKRVPYAGVSVFLKEFEDPKDTPPPTRVE
TKDERKERKRKERAEQIAYKLEQDLALWDPSNAATATGDPYKTLFVARINYDSSESKLRR
EFEVYGPIRKISLVSDKTSGKPRGYAFIEFEHERDMHSAYKHADGKKIDGRRVLVDVERG
RTVKGWRPRRLGGGLGGTRKGGPDENTRFSGRDEFSTSSGYRGREESPSRDXRRRSRSRE
RRRSRSRERRRSRSRERGAERGAERGAERGAERRENDLAGRSPLRRKKEKEAEEVDHETE
RGAALATGRGPDAAEAVIASVTVTASEGAERKEGNKTSARTVSRSLRKRTWILTQGTEAT
TLRTRMEEKRKRRQDRRMRSTRDEAAAQLNKIMFYFLQTLNCCFCQVLYIV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctttttaccaccaaatttactggcattatttgccgccagagaccctattcag
tatttaccaccagctacaaagttaggttttgaaaagaaacgcgtgccgtatgcaggagtc
tccgtttttctaaaggaatttgaggaccctaaagacaccccacctccaaccagagttgaa
actaaagatgaacgaaaagaaagaaagaggaaagaaagagctgaacagattgcttacaag
ctggaacaagatttagccctgtgggaccctagcaatgctgccacagccacgggagatcct
tacaagacactttttgtggcccgaataaactatgattcaagtgaatctaagctacgcaga
gaatttgaagtctatggaccaattcgcaagatttcattggtatccgacaaaacttcaggg
aaaccaagaggatatgcatttatagagtttgaacatgaaagggatatgcactctgcctac
aaacatgcagatggtaagaaaattgatgggaggcgtgttttggttgatgttgagcgaggg
agaactgttaaaggttggagaccaagaagattaggaggtggtctcggaggaactaggaaa
ggtgggccagatgaaaacactagattttcaggacgagatgagttcagtaccagcagtggc
tatcgtggccgcgaggaatctcccagtagagacnagcgccgacgtagccgaagtcgagag
cgacgtagaagtaggagccgagaaaggaggaggagcaggagtcgagagagaggagctgag
agaggagccgagagaggagccgagagaggagccgagaggagagagaacgacctcgcaggg
aggagccctctgaggagaaagaaagaaaaagaggcagaagaagtcgatcacgagacagaa
agaggagccgctctcgcgacaggaagaggtccagacgcagcagaagccgtgatcgcaagc
gtgaccgtgacggcaagcgagggggcggagaggaaggaggggaacaagacttcggcgagg
acggtgtcccgatcgttaaggaagaggacgtggatacttacacagggtacggaggctaca
accctgaggaccagaatggaggagaagaggaagaggagacaggacaggagaatgaggagt
acgagggatgaagcggcggcgcagctgaacaagatcatgttttatttcttacagactttg
aactgttgtttttgccaagtcttgtatattgtgtag
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