Crassostrea virginica (eastern oyster): 111129313
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Entry
111129313 CDS
T09197
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111129313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111129313
Spliceosome [BR:
cvn03041
]
Common components
Common spliceosomal components
SR proteins
111129313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
RRM_occluded
SET_assoc
Motif
Other DBs
NCBI-GeneID:
111129313
NCBI-ProteinID:
XP_022331313
UniProt:
A0A8B8DUJ6
LinkDB
All DBs
Position
4:34645006..34655630
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AA seq
327 aa
AA seq
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MGTRVYIGHLSYHAREKDVERFFKGYGRIRDVMLKNGYGFVEFDDSRDAEDAVYELNGKE
LCGERVSVEHARGTVRGGGGGYRGDSYFRDSRRPMWIDKYGPPTRTEYRVIVENLSSRVS
WQDLKDYMRQAGEVTYADAHKQQKNEGVVEFATYSDLKRALDKLDDTEINGRKIRLVEDK
SRRSRWRSRSPSTSRSRSRSRRSRSRSRSRSRSRSRSRKRRAYSRSPSRSRSRSRSRSRS
RSASKDRGRSKSRSKCRSRAKSKSRSRSKSRSGAKSKSKSRSKSKSRSRSKSKSRSRSKS
KSHSKSPSRSKSRSKSPVKEEPMQEEN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccgtgtgtacatcggtcacttatcgtatcatgccagagagaaagatgtggag
aggtttttcaagggctatggtagaatcagagatgtcatgctaaaaaatggttatggtttt
gttgagtttgatgactccagggatgcagaagatgcagtgtatgagttgaatggaaaagag
ctttgtggggaaagggtttctgttgagcatgctcgcgggacggttcgtggtgggggtgga
gggtaccgaggggatagttactttcgggacagcaggagaccaatgtggattgacaaatat
ggtccgccaactagaactgaatatcgggttattgttgaaaatctttcgtctcgagtcagc
tggcaggacttgaaggattacatgaggcaagcaggggaagtaacttatgctgatgcccac
aaacagcaaaaaaatgaaggtgttgtagaatttgccacctactcagacttgaagagagcc
ttggataaactggatgatactgagataaatgggagaaaaatccgcctggtggaggacaaa
tcgaggaggtccagatggagatccaggagtccttccacatcccgaagtcgtagtcgctcc
agaagatccagatcccgtagccgttccaggagcagatccagaagcagatctcgcaagaga
agggcttattccagaagcccaagtcgcagcaggtctcggagccggagtcgatccaggtca
aggtcggcatctaaggatcgaggcaggtccaaatctagatccaagtgcagatctagggca
aagtctaagtcgagatccagatccaagtctagatctggggcaaagtcgaagtccaaatct
agatccaagtcgaagtccagatctaggtcaaagtcgaagtccagatccaggtcaaagtcc
aaatctcattccaagtctccctcaaggtcaaagtccaggtcaaagtcacctgtcaaagaa
gagcccatgcaagaagagaactag
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