Crassostrea virginica (eastern oyster): 111129379
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Entry
111129379 CDS
T09197
Name
(RefSeq) DNA polymerase iota-like
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111129379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111129379
Enzymes [BR:
cvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111129379
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
111129379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_HHH_1
IMS_C
2EXR
IMS_HHH
DNA_pol_lambd_f
HHH_2
HHH_5
Cdd1
Motif
Other DBs
NCBI-GeneID:
111129379
NCBI-ProteinID:
XP_022331447
UniProt:
A0A8B8DT77
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All DBs
Position
4:29001216..29012699
Genome browser
AA seq
720 aa
AA seq
DB search
MEDSNDEDELWKEPVTDTTLQKHETDFERDQVGDSHLPHRRTIIHIDVDCFYAQVEMIRN
PALRDKPLGIQQKNIVVTCNYVAREFGVTKLMYIKDAKEKCPQLVLVSGEDLTNYRNVSN
RISEFLKKYTPYVERLGMDENYLDVTDLVKLKKDNIPSTVAGHVFGDSTQHKSGMCTCGC
YERILLGSHLAAEIRAALHKEIGITCCAGISYNKLLAKLVGEQHKPNQQTTLFPSSVPAF
MAKLPKARNIPGVGHATARKLADFGVVTMVDLQQCPLEDLKREIGDSLAVTIKELSEGID
ENPVIPYSKPQTLSDEDSFKSCCSVKEVHQKLRDLIKSLMIRLVEDGRLAGTVRLTIRRL
SAENKYMNRESKQCNIPSHIITKLSKDNQQQICDKMEDILMSLFNKLVDVRKPFHLTLMN
VAFCNLMERSKNSISHFFSPPKNQNLHTTIDKHCRSNSRSNSTSEVCSESESITPSSMQE
KSNNNLTSSYLSSPKKSFVRTFEENDAKNLSAIKPCSTMVNRGDSVHHPLNKRKPSSPSS
GFFNKRVKTTQESKDCVNSDEQSYIDSEIFSQLPTEIQQEILEAKSSAPVISVTSVVQTT
DSDFQSEVCYESSVKDSQKGQQPPPKAKSDDFLQCKQGSLNNYETSLTKSVTTAIVPAGY
DREVFLNLPPDIQKELIQEQERKADWAHVSRGKNGVKTSRNKDSQPSKSGNLLKYFHKSK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaagattctaacgatgaagatgagctttggaaggagccagttacagacactacctta
caaaagcatgagactgactttgagagagatcaagtcggagattctcatcttccccatcga
agaaccatcattcacattgatgtagattgtttttatgcccaggtggaaatgataaggaac
cctgcacttcgggacaaacctttaggaattcagcagaaaaacatagtggtgacctgtaac
tatgttgcaagagagttcggtgttaccaagctgatgtacatcaaggatgccaaggagaaa
tgtccacagcttgtgctggttagtggagaggatctgactaattacaggaatgtgtccaac
aggatctcagaattcctcaaaaagtatacaccttatgtagagagactggggatggatgag
aattacctagacgtgacagatttggtgaaattgaaaaaggataacatcccttcaacagtt
gctggtcatgtatttggtgattcaacgcaacataaaagtggtatgtgcacctgtggttgc
tatgagaggatcttgcttggttcccaccttgcagcagagattcgagcagctttacacaaa
gaaattggaatcacctgctgtgctggtatatcttacaacaagcttttagccaaactggtc
ggagaacaacacaagcctaaccaacaaacaactcttttcccatccagtgtgccagccttt
atggccaaactgccaaaagctagaaacattcctggtgtcggccatgccactgctcgcaaa
cttgccgattttggagtggtaacaatggttgatttgcagcaatgtcctctggaggatctg
aagagagaaataggggatagcctggctgtcaccattaaagagctgagtgaaggcattgat
gagaaccctgtcattccttacagcaaacctcagacattaagtgatgaggattccttcaaa
agttgctgctctgtaaaagaagtccatcaaaaactacgagatctgataaagagcttgatg
ataagacttgttgaagacggacgcctggcaggcaccgtaagactgaccattcgtagactg
agtgccgagaataagtacatgaatagagaatcaaaacagtgcaacatacccagccacatc
attacaaaattgtcaaaagacaatcagcaacaaatttgtgataaaatggaagatattttg
atgtctttgttcaacaagttggttgatgtgaggaagccatttcatcttactcttatgaat
gtggcattctgtaacctaatggaaagaagcaagaattctatcagtcacttcttttctccc
ccaaaaaaccaaaatttgcacactaccattgacaagcattgcagaagtaattcaagaagc
aattcgacatctgaagtgtgtagtgagagtgaatcaataactccctcatcaatgcaagag
aaaagcaataacaatttaacttcatcatatttgtcctctccaaaaaaatcttttgtgaga
acctttgaagaaaatgatgccaaaaatttgtctgcgataaaaccgtgttcaactatggtg
aatagaggagacagtgtgcatcacccgctgaacaagaggaagccctcttctccatcatct
ggcttttttaataaaagggttaaaacaactcaagagagcaaagactgtgtaaattcagat
gaacaaagctacattgactcagagatcttcagccagcttcctactgaaatccagcaagaa
atactggaagctaaaagcagtgctccggtgatttctgttacttccgtagtgcagactaca
gactcagactttcaaagtgaagtgtgttacgaatccagtgtaaaggattctcaaaaaggg
caacagccaccaccaaaagcaaagtcagatgattttttacaatgtaaacaaggtagttta
aacaattacgaaacttctctgacgaaatctgtgacaacagcaatagtcccagcaggctat
gacagagaggtatttctaaatctacctccagacattcagaaagaactgattcaggaacaa
gaaaggaaagctgactgggcacatgtttcccgggggaaaaacggagtgaaaacttctcgc
aacaaagactctcaaccttctaaatcgggaaatcttttgaaatatttccataaaagtaaa
tag
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