Crassostrea virginica (eastern oyster): 111129405
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Entry
111129405 CDS
T09197
Name
(RefSeq) homeobox protein six1-like
KO
K15614
homeobox protein SIX1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111129405
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
111129405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
111129405
NCBI-ProteinID:
XP_022331483
UniProt:
A0A8B8DVD9
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Position
4:complement(28820829..28853453)
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AA seq
329 aa
AA seq
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MQAPMMDPYTYSVFSGRAGPGNGAHLGHFPESVPMLHDQTPTSSVGSPNPAMLPSFGFTQ
EQVACVCEVLQQGGNIDRLARFLWSLPACEHLHKNESVLKAKAVVAFHRGNFKELYKMLE
SNNFSPHNHPKLQALWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCF
KEKSRTILREWYQHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEQKDRDGSQ
GGSGLGQDIGSPGSDKDDLSEDGGLVQTKIEPQEINTTQAHSIYTDLQKAMPSGPYSGLI
PNSSMTHSAVSNGSSVDHHSDMLDSYQTL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcccatgatggacccgtatacctactcagtttttagtggtagagctggaccc
ggaaacggcgcccatcttggtcattttcctgagtcggtgccaatgttgcacgatcaaacc
cccacatccagtgtgggttctccgaatcccgccatgcttccgtcctttggatttacacaa
gagcaagtagcgtgcgtctgtgaagttcttcaacaaggaggcaatattgatagactagct
cgcttcctgtggtctttgccagcttgtgaacatcttcataagaatgaaagtgtgcttaaa
gctaaagccgttgtggcatttcatcgcggaaatttcaaggaactctataaaatgttggaa
agcaataacttctcacctcataatcatcccaaactacaagcattgtggctcaaggctcat
tacattgaggctgagaaactccggggacgacccctaggggccgtgggaaaatacagggtc
aggaggaagttccccctcccaagaaccatctgggacggagaggagaccagttactgtttc
aaagagaaatccagaactattttaagggagtggtaccaacataatccttacccttctcct
agagagaagagagaactagctgaagccacgggactaacaaccacacaagtcagcaactgg
ttcaagaaccggcgacaacgcgacagagccgcagaacagaaagacagggacggatcacag
ggcggatccggactcggacaggatatcggatcacccggaagtgacaaggatgaccttagt
gaagatggcggtctagttcaaactaagatagagccacaggaaattaacactacgcaagcg
cattcgatatatacagatctccaaaaggccatgcccagtggtccgtattctggcctgatt
ccaaacagttcaatgactcattcggcagtgtctaacggctcatccgtggaccatcatagt
gacatgttagacagttaccagacattatga
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