Crassostrea virginica (eastern oyster): 111129479
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Entry
111129479 CDS
T09197
Name
(RefSeq) polycystic kidney disease protein 1-like 2 isoform X1
KO
K04988
polycystin 1L2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111129479
04091 Lectins [BR:
cvn04091
]
111129479
Ion channels [BR:
cvn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111129479
Lectins [BR:
cvn04091
]
C-Type lectins
Others
111129479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
REJ
PLAT
Laminin_G_2
Laminin_G_1
GPS
Ion_trans
DUF2956
Motif
Other DBs
NCBI-GeneID:
111129479
NCBI-ProteinID:
XP_022331588
UniProt:
A0A8B8DVB0
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All DBs
Position
4:55613309..55654382
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AA seq
2089 aa
AA seq
DB search
MWGFWTAFLCFCLPSIFCTGELGFSGNESVEVKVMLTENRVQSFILELSFRSYKTDGLLL
VHNSSTSDFYTVSVKDKHVVFWMQSSGKLLKVRSIHPLEYDRWNNVTLTRTKLLISMELN
KNPVIESAEIFTGSSEQWIMLGGSLFLGGYPTFPGLTNNAPTVLPFSGCIRNLTFQRAAW
VKTAYKYSLWQDTTLVNQVQSGLIKNCSTTQLCEYLISIRNMEARKAHLCHWNETQVVIS
SHVSSSCPSASPAISYQWTVYYLYGKLTTISTNSSRNVLRTTPMNLPTMTLNVAPFSADI
PMGVYGVNLTVELSTLQENKSFTQLGYFVVGCKDVQSQTDADCEWLQKVIFLDIMLPTEL
KNTNHCLQIPPITSNGTILDTTAFWELEKEARNITANAQHLAIFHPQLQLVRCVRGCGAK
VGGGQVLTLQTQCKSCETHTWSLLACDPLCSTEISLPQSLRNDSMFSFSVNGSFVSQQVV
YTGTYLSGRNVTAGYNLTVNQPPGVGNCSITPQSGLTLLTGFNVSCQGFSDPDSPLLYIL
SQVQTSGKKTQLMKSDEASISSLYLNEGYPENNYTLSLTVECQDSLGLTSPPIPLTVQVL
PLSSGSDVMDVISGNILGNATSTGIISDLIAAGKQTAVTQILQTSVLALNNDVAANESDV
ERQNQRKEIREAVVAILANSSTGTQDLEMVTSVLNSATEFQEELSPETQEQAAVLYEGMS
SAFSQQSVNGSQTDAETTAGLLLEGVTMLLDTRTIYGSRALHSAPTNHTLQTEVKSAAER
LLGTVDVITDVMMNYLIPDTPPAVFTTRKMNLALSKSSPTHTTGKSLSLDKGENSGNFTI
PADGKLSTLLSNTSFTTIQVMLTEKNPYIWDLASDNLTTPMVSLTLRDDLHQRVNVTGLT
DPVQIYISNFNPKVQKTEENFTLNVVDLDSFNASLSDDLCRIMKFNSTEGRSTILTILPL
TLNLSISMMEIQNTTDISHQNITSNGSSLNSSNNFTYIFTSLPTGVITLGFCIDQTVDNF
LQLNQQCLILTSCPVTLETQLYSAECMYWNVTKDMWSSSGCQVGPQTSPAIVHCECTHLT
AFSGSFFVAPNFVDPFADAALFLTFFSNPVVVSCVILIWLVYFTLLTWATKQDRLDKYRG
GVTIAHENRPDHDYSYLVCVITGWWKDAGTTANVSLSFSGTRGHSARHCLSESVPGKQCF
LAGYEDWFLVTTPQSLGELRSLSVWHDNKGKSPHWYLSRVLIEDLRTQRTWTFLYSDWVA
VDRGSVSLKLTLQPCSLEDLTGHTNQQFLFKSSRDLRESHLWLSIASKPSYSSFTRVQRL
SCALCLLLMTMLTSLMFHGIPTDDPADQAQVGRLTLSLSDLVIGVQSGLIMFPVNILIIQ
LFLKAKRRPRGATPVTAESKNKTEKKSKKSEKKYSVDSLEKGEEDEKDDSSADEEEEREV
AKEDGILPWWTVYIAWTLVLSISFVSSYFVMLYGLKFGYQKSVDWLVSFFTAFFQSALVT
QPLKVIAISLVFTMILKRPVLVQGGKASTEKMSKQIEVMDNRQGHYVPDPLSRRLMNKIR
QKLKLEEEIHVTLRDMALYAVFVICILFMAHGHRTVRKSLMVQQFMENTFIDPRHPPIYS
QGSGYSTDILELQNVVNVELFWSYIKERIIPVLGEMSLGNRTQLGLVSEYFLLGKYRIRQ
IRIKEDSCDFPNDPRMKSMIPGLNCSGKYWMGNEDSQDYNLTWTKPLPQKLKQIPDTWSH
RSSWSLKTLPYEGMLSTYSGGGYTVLLDGNVTQSLAVIQDLQDSSWIDYRTRAVFVEFTS
YNANIKMFCVVMIVFEFSNLGALFPAYQVFTTKYFNYGSSLEMFTAFCEILFVIFALCFF
YLEIKRLYYGGRAKYFRDPWSYIEIIQIILSFSIVGLYLKRIVSVSSKLTSLRSTEEFVS
FYTSIFWDMTLNYVLAFFVFLVILKFFKLLKFNIRMYFLSQTLSIAKKNLLGFALIVMIV
VVAFAHFAVLTFGTVLQGFAGMGESLITLFRLALGESDFPSLKLANSYLGPIFFFLYIFM
VQWTVLVMFMAILNLAIEETKENMSQMKNDLEVVDYIYNRLHQLLPKCH
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggttttggacggcattcctttgcttttgtctaccaagcatattttgtacaggt
gaacttggctttagtgggaacgagagtgtagaggtaaaggtcatgttgacggagaaccgc
gtgcagtctttcattctggagctcagcttcagatcgtacaagacggacggactgttactg
gtccacaactcctccacctcggatttctacacggtatctgtgaaggacaagcatgtggtg
ttctggatgcagtcatcaggtaaactgttaaaagtgaggagcatacatcctctggagtat
gacagatggaacaacgttaccctgactcgcaccaagcttctcatctccatggagctgaat
aaaaaccctgtcatagagagtgctgagatcttcactgggtcgtcagaacaatggattatg
ctgggagggagcctgtttctgggaggataccctaccttcccaggactgaccaataacgcc
cccacggtccttccattcagtggatgcatcaggaatctgacctttcaaagagcagcttgg
gtaaaaactgcgtacaagtacagtttgtggcaagacaccaccctagtcaaccaggtccag
agcgggctcattaaaaattgcagtactacccagctttgtgagtacttgatcagcatcagg
aacatggaggccaggaaagctcacctgtgccactggaacgagactcaggtggtcatcagt
agccatgtcagtagcagctgcccgtctgccagtccggcgatatcctaccaatggaccgtg
tactacttgtatgggaagttaactacaatatcaaccaactccagccgcaatgtccttaga
acaacccccatgaacctacccactatgacgctgaatgtagcaccattcagtgcagacatc
cctatgggagtgtatggtgtaaacctcacggtagaactgtccacactccaagagaacaag
tcattcacacagctgggctactttgtggtgggctgtaaggatgttcagagccagacggat
gctgactgtgaatggctccagaaagtaatatttttagacatcatgctcccaacggaactc
aagaacacaaatcactgtttgcagattccaccaatcacatcaaatggaacaattcttgat
actactgcattctgggaactagagaaagaggccaggaacatcacagccaatgcccagcac
ttggccattttccacccccaactacaattagtcaggtgtgtgagaggttgtggtgctaag
gtggggggcggtcaggtcctgaccctacagacgcagtgtaagtcctgtgagacccacacc
tggtctctgttggcctgtgacccgctttgttccaccgagatcagcctcccacagtccctg
cgaaatgacagcatgttcagcttctctgtgaatgggagctttgtcagtcagcaggtggtt
tacacaggaacttatctctcggggagaaatgtgacggcagggtataacctgaccgtgaat
cagcccccaggggtggggaactgttccatcaccccccagtctggccttaccctgctgaca
ggattcaacgtctcctgccagggattctccgatcccgactccccgctgttgtacattctg
agccaggtccagacttcagggaagaagacacagctgatgaaatctgatgaggcatccatt
tcctccctttatctcaatgagggttacccagaaaacaactacactctgtccctgactgtg
gagtgtcaagacagcctaggtctgacatcacccccaatccctttgactgtacaggtgctt
cctttgtcgagcggctcagatgtcatggatgtgatatctgggaatatcctcggaaatgct
acatctacaggaatcatcagtgacctgatagcagcaggaaagcaaacagctgtgacacag
attttacagacctctgtgcttgctttgaataacgatgttgctgctaatgagagtgacgtg
gagagacaaaaccagagaaaagagatcagggaagcagttgttgccattcttgctaactcg
tcaactggtacccaggaccttgagatggtcaccagtgtactgaactcggccacagaattc
caggaagagctgtctccggaaactcaggagcaagcagctgtactttatgaggggatgagt
tcagccttctctcaacagtctgttaatgggtcacagactgatgcggaaaccacagcaggt
ctgttgctggagggggtgaccatgctgttagacaccaggaccatatacgggagcagggcc
ctccactcggcccccaccaaccacacgctacagacagaggtgaagagtgcggccgagcga
ctcctgggtacagtagacgtcatcacggacgtgatgatgaattacctcatccccgacaca
ccccccgcagtgttcaccaccaggaaaatgaacctggccctgtctaaatcctcccccaca
cacaccacagggaagagtctgtccctcgacaagggggagaactctgggaacttcaccatc
ccagcagatgggaagttgtctaccctgctcagtaacacatccttcaccaccatacaggtc
atgctgacagagaagaacccctacatctgggacctggcctcagacaatttgaccactcct
atggtgtccttgaccctgagggatgaccttcaccaaagggtcaatgtcacaggcctcact
gaccctgtacagatctatatctctaacttcaatcctaaagtacaaaaaacagaagaaaat
ttcactctaaatgttgtggacttggacagttttaatgcttcactgagtgatgatttgtgc
agaattatgaagtttaactccacagaagggcgatccaccattttgaccattctaccactg
acactgaatctgagtattagcatgatggagatccagaatacgacggacataagtcaccag
aacatcacaagcaatggaagctccctaaacagcagcaacaacttcacctacatatttact
tccttgccaacaggagtgatcacccttggattctgtattgaccagactgtggacaacttt
ctgcagctgaaccagcagtgtttgatcttgacctcgtgtccagtgaccttggagacacag
ctgtattcagcagagtgtatgtactggaatgtcaccaaggacatgtggtcttccagtggg
tgtcaggttggcccccagacctccccagccatagtgcattgtgagtgcacgcacctgacg
gcattttcgggtagtttcttcgtggcgcctaacttcgtggacccctttgctgatgcggcc
ctcttcctgacgtttttctctaacccagtagtggtgtcctgtgtgatcctcatctggctg
gtctacttcaccctgctgacatgggccacaaagcaggaccgactggacaagtacaggggg
ggagtgacgatagctcacgagaaccgtcccgaccacgactactcttacctggtgtgtgtc
atcacgggctggtggaaggacgcgggcaccacggcgaacgtcagcctgtcgttctcaggg
acccggggacacagcgcccgacactgtctcagtgagtccgtgcccgggaaacagtgcttc
ctggccggctacgaggactggttcctggtgaccacaccccaaagtcttggggagctccgc
agtctgtccgtctggcacgacaacaagggaaagtcacctcactggtacctgtcccgcgtg
ctgattgaggatctgaggacccagaggacctggaccttcctgtacagtgactgggtggca
gtggaccgtggctcagtcagcctaaagctcaccctccagccctgctccctggaggacctc
actggccacaccaaccagcagttcctcttcaagtccagtcgcgacctgcgcgagtctcac
ctgtggctgagcatagcctccaagccctcctacagctccttcacgcgtgtccagcgcctc
tcctgcgccctctgtctcctcctgatgaccatgctgaccagcctcatgttccacgggatt
cctacagatgaccccgcggatcaggcccaggtgggccgcctgaccctgtccctatctgac
cttgtgattggggtccagagtggcctcatcatgttccctgtcaacatcctcatcatacag
ctgttcctgaaggccaagaggaggccaaggggggcaactccagtcacagcagagagtaaa
aataagactgagaaaaagtccaaaaagtcagagaaaaaatactctgttgatagcttagaa
aaaggtgaagaagatgaaaaggacgattcttctgctgatgaggaggaggagagagaagtg
gctaaagaagacggcatcctcccctggtggacggtttacatcgcctggaccctggtcctc
tccatctccttcgtctcctcctactttgtcatgctgtacggcctgaagttcggctaccag
aagagcgtggactggctggtctccttcttcactgccttcttccagagtgcccttgtcacc
cagcccctcaaggtcatcgctatatcccttgtcttcaccatgattttaaagagacctgtg
ttggttcagggcggaaaggcaagcacagagaagatgagtaagcagattgaggtcatggac
aatcgtcaaggtcattacgtccctgaccctctgtcccggagactgatgaacaaaatccgg
cagaagctgaagctggaagaagaaatccatgtgaccttgcgggacatggcgttgtatgca
gtctttgtcatctgtatcctgttcatggctcatggacatcgcaccgttcgcaagtcactg
atggtgcagcagtttatggagaacacgtttattgaccccagacatccccccatctactca
cagggatcaggctactccacagacattctggaacttcaaaatgtggtcaatgtagaactt
ttctggtcctacattaaagagcgtataattccagtcctgggtgagatgtcgcttggcaat
cggacacagctgggtttagtcagcgagtacttcctgctgggaaagtatcgcatcagacaa
atacgaatcaaagaggacagctgtgactttcctaacgatccgagaatgaagtcaatgatc
ccgggtctcaactgctctgggaagtactggatggggaacgaggacagccaggactacaac
ctgacctggacaaagccccttccccagaaactgaagcagatcccggacacctggagccac
cggtcatcctggtccctgaagacacttccctatgaggggatgctgtccacttacagcgga
ggtggatacaccgtgcttttagatgggaatgtcacccaatccttggccgttatccaggac
cttcaggattccagctggatagactacagaactcgagccgtgtttgtcgagttcacctcc
tacaatgccaacatcaagatgttctgtgttgtgatgatcgtctttgagttctctaatctc
ggggcccttttcccggcatatcaagtatttaccaccaaatatttcaactatggcagttca
ctggaaatgtttactgccttttgtgaaattctgtttgtgatttttgctttgtgtttcttc
tacttggagatcaaacgactgtattatggaggaagagccaagtactttagagatccttgg
agttacatagaaattatccagatcatcctatcgttttctattgtgggcctctatctgaag
cgaatagtttctgtatcctccaaacttacaagcttgagatccactgaggagtttgtcagt
ttctacacgtccattttctgggacatgaccctgaattacgtcctggccttttttgtgttc
ctagtgattctgaaattcttcaaattgctgaaattcaacatccgaatgtacttcctttcg
cagactctctccatagccaagaagaacctccttggattcgccctcatcgtgatgatcgtg
gtggtggccttcgcccatttcgccgtgctgacctttggcacggttctgcaggggtttgct
gggatgggcgagtcacttatcacactgttcagactggccctgggagaatcggatttcccc
tccctaaaactggccaatagctacctaggacccatcttcttctttctgtacatcttcatg
gtgcagtggactgtcttggtcatgtttatggccatcttaaatctggccatagaggagact
aaagagaacatgtcgcagatgaagaatgaccttgaggtggttgactacatctataacagg
ctacatcaactgctgcccaaatgtcactaa
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integrated database retrieval system
