Crassostrea virginica (eastern oyster): 111129706
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Entry
111129706 CDS
T09197
Name
(RefSeq) fibrillin-1-like isoform X1
KO
K23342
fibrillin 2/3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111129706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cvn00536
]
111129706
Glycosaminoglycan binding proteins [BR:
cvn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111129706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
hEGF
TB
EGF_3
Plasmod_Pvs28
EGF_MSP1_1
AEP1
Motif
Other DBs
NCBI-GeneID:
111129706
NCBI-ProteinID:
XP_022331877
UniProt:
A0A8B8DUH0
LinkDB
All DBs
Position
4:33536808..33578177
Genome browser
AA seq
2815 aa
AA seq
DB search
MKLVMRSTLKYLSILQIVIILCFVEKHHVDGQSNPNDRRYWSYYQRDGHNRSPPDSGPSQ
PQVNFLRGPNTCGSSSRRYCCQGWTRMPGQYRCIIPICQHGCNGGNCIRPNLCLCSNGQP
SSSCQTAIACNPQCKNGGRCIGNNRCACPYGYSGPSCENDYRVGPCFTQLSDNMCRGQLT
GLVCTKNLCCATVGKAWGNPCEQCPVHPFPCRRGYIPNLQTNTCQDVNECVAIPGVCGGG
TCVNSVGSYRCECKTGQRQNPITQDCEDIDECAENRDRCQNGQCTNTQGSYFCTCNQGYE
LTPDRSTCVEIQKKRCYRQVVNKRCSQPMVPLLSLADCCCDSGKGWGDQSNCQICPQPGD
EAHSELCRKGGGFTRDKCRLFPNLCVNARCETTEYTYRCVCLPGYKPTTDKDRCTDIDEC
TEQQGVCTNGQCLNTPGSYRCRCNRGYTLSSGGQCIDVNECATNRMCPNGRCVNMAGSYK
CECNPGFRPSSNLQVCYDINECTENGKLCTNGRCQNTEGSYHCICNQGFRLSPDRAYCLD
YNECERTGMCTHGVCVNLNGGYRCVCNTGFTSSSDGRTCVDVNECLRKPCQNGICINNQG
SYRCECQPGFQLQTDGQTCLDTRRGNCYLEYRQGRCSNALAMQISKSSCCCMDDDTPKGW
GPRCELCPRKGDALYSQLCRGTTDVNECMLYPNICENGACENLQGTYRCVCDKGFTPNPN
RKKCLDVNECERYPDYCDGGNCKNTIGSFHCTCPTGFRLNRDTTACEDINECLDNNPCVG
GTCTNIPGSFRCDCLDPGTKLDTTGRICLDNRKGSCWLEINNGRCENNARALVTKSECCG
SIGVAWGSPCEECPLAPQRQCPTGYATNDGKNCLDINECEMFANVCEGGGLCVNTQGSFR
CNCPPGLILDATGRRCIDKRKGTCYLEYSRGSCQRPVEGSYSRATCCCSLGRAWGTDCTS
CPNRDSDEFKQLCDSTKQPDINECLEFPNICKDGVCSNTVGSFSCRCNQGYTLDETGTTC
LDINECQISFGICSNGSCVNTPGMFRCQCDEGFRPVMMDQMCMDIDECEELSSPCKGGSC
LNLPGTFLCECPPGLMLSPDGQSCQDIDECGDTSSLCSNGVCENYLGGYQCRCLEGYSPN
SQHTSCLDIDECATGNGGCQSLCFNKPGSFSCGCEPGYLLMPDQRSCQDTDECKEIKDIC
SGGVCSNLPGSHRCTCVGGLVPSADGKQCLDVNECAQNANICLQGTCHNTHGSYECICEP
GYSVKPESRNPACTDDDECTSGEANCDRNAKCINTLGSYKCDCVPGYSGDGYTCRDSNEC
TRNNGGCSIDADCINLPGSYKCVCEEGFKGDGYTCGDVDECSVNPDLCRYGNCINLAGSY
RCECDMGFTPTLDGKDCRDIDECSYFSNLCINGECENTLGMFRCRCNQGFKQDVSGGNCT
DINECDNPDNCLYGTCVNVPGSYLCQCPPEKVLNPTGTACIDKRRGNCYLEVGRRGRCSN
VIGSDVYRASCCCSFGQGWGEVPGMCEPCPLNGTAEYQLLCPGDPGLRPDEETGIPIDID
ECQEIDGLCDGGECQNTFGSFFCVCPKGHRLLNYTCVDIDECIENGPLCGAGSCLNTKGS
YRCVCPDGYVLMEGETDCMDMRKGNCYSTYYTTTGPGPHQYICENPLSRNLTRNQCCCTV
IGKAWNSPCEPCPEANTEDYNKLCEVSAVVKDIDECTLFGDAICKNGRCINTKESFRCEC
NPGYKYDVDSHSCYDEDECRRSLPPCVPIAQCVNTPGSYRCECPAGYSLHQNGHSCQDIN
ECTMFPGVCANGVCRNLEGRFRCLCNPGYRLTQSRDACIDIDECSAQPGTCNNGTCENTD
GHYRCHCHPGFRLTINQDCEDINECLTEVGLCQNGRCVNTIGNFTCQCQSGYMISPDGRT
CQDVDECTLFREICGNGECRNSEGSYECICHEGYELTRARDTCIDINECTSVRGICAGGQ
CRNLEGGYRCVCPPGLLLTADGQKCIDVRMGNCFNRFYNGQCVSPRLLNMTKADCCCTQG
QAWGSRQQCAVCPTEDEAEFKTLCPDGYGRVVDPSGGIVDVNECAVNPNLCVNGICVNTD
GSFRCECLAGYKLGADGRTCEDKNECDDSPGVCGNGTCRNVVGGFECFCSPGFEPGSDGT
CKDIDECGGPQNNCAFRCVNLPGTFQCVCPKGFTLAPDNSHCQDVDECQTRANNCRYACK
NLVGSFMCVCPEGFTGTGDNCRDVDECRDPRVCQPGRCVNLQGGYQCMCPPGYSQSLDRK
HCYDQREGTCYQELLGGRCVASNFYRMTRQECCCSGAAAWGPSCNRCPTPGTRQFQELCP
EGIGKTPDGKDINECLKFPGICGNGYCINTQGSYRCRCNRGYKTDITSTKCIDVDECREG
TSSCEFDCVNTVGSYTCSCPRGYVLNRDGKTCRDLDECATMRHSCQQICTNTEGSYRCSC
KTGYRMEANQCRDIDECREDVSLCTPGGQCHNTRDGYKCVCKRGYKLDSTGKKCIDINEC
ENGRCDDRCENIPGSYKCMCPPGYKPVYGQCIDENECLTDDICGLASCYNVPGSYNCQCG
PGTNFDPRLMTCLEANVCMNAPCLFGCTLSGPSFVCGCPPGYQTLGVGHCVAVSPDSGAG
GSFPTGGNIPHVPGPDTGKLPQGEGCFECDIKNQDIPLSKRAKRAVHNLTTSAVGGISHR
HHLSRKLQPEVVSEVLKFYIKRKDVYRKKRLITVLPSLIALKNNVKYHILHGNEKKIFVV
HKKHGISSLQFRRKVRKSRVFKLTVEAKPIHKEEKVAGSKVILRRTLLHVEVHVL
NT seq
8448 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggtgatgagaagtacactgaaatatttatctattttacaaatcgtgatcatt
ctgtgttttgttgaaaagcatcacgtggatggacagagcaatcccaatgaccgtcgatac
tggtcgtattaccaaagagatgggcacaaccgctcacccccagacagtggtccctcccaa
cctcaagttaacttcttgagaggacctaacacatgtggttccagttctcgtcgctattgc
tgtcaaggatggactcgaatgcctggccaataccgctgtattatacccatctgtcaacat
ggatgtaatggaggaaactgcattcgtcccaatctttgtctctgttccaatggacaaccc
tcctcatcttgtcaaacagcgattgcatgtaatccacaatgtaaaaatggaggccgatgc
attggaaacaacaggtgtgcctgtccatacgggtactcgggaccgagctgtgagaacgat
tatcgagtgggtccctgctttacccagctctctgacaacatgtgtcgaggtcagctgaca
ggccttgtctgcactaagaacctttgctgtgccactgttgggaaagcttggggaaatccc
tgtgaacagtgtcctgtccacccattcccgtgtcgccgtggatacattccaaacctccag
acaaatacatgtcaagatgtgaacgagtgtgttgccatacctggtgtctgtggaggagga
acatgtgtgaattctgtgggatcctacaggtgtgagtgtaagacaggtcaacggcagaac
cccatcacacaggactgtgaagacattgatgaatgtgcagagaatagggaccgctgtcag
aacggccagtgcactaacacccaaggcagctacttctgcacctgtaaccagggctacgaa
ctcaccccggacaggtctacctgtgttgaaatacagaagaaaaggtgctataggcaggtt
gtcaacaagcggtgttcccagcccatggtgcctctgctgtcactggctgactgttgctgc
gattccggcaaaggatggggggaccagtcaaactgtcagatctgccctcaacccggcgat
gaggctcactcagagctttgtcgaaaagggggaggattcacacgagataaatgtcgtctt
tttcccaatctgtgcgtcaatgctcgctgtgagacaacagagtatacctataggtgtgtg
tgtctccctggctacaaacccaccactgacaaggaccggtgcacagatattgatgaatgc
acagaacagcaaggtgtatgtaccaatggtcagtgtttgaacacacccggtagctacaga
tgtcgctgtaatagaggatacacactctcctcaggtggccagtgtatagatgtgaatgaa
tgtgctacaaacaggatgtgtccaaatggccggtgtgtaaacatggctggcagctataaa
tgtgaatgcaatcctggttttcgtccctcgtccaatctacaggtctgctatgatatcaat
gaatgtacagaaaatggtaaactatgtacgaatggacgatgtcagaatacggagggatcc
taccattgtatctgtaaccagggatttcggctgtccccggaccgagcttactgcctagat
tacaatgaatgtgaacgcactggtatgtgtacacatggtgtatgtgtgaatctaaacgga
ggctacaggtgtgtttgtaacactggcttcacctcttcctcagatggcagaacctgtgtg
gatgtcaatgaatgcttgaggaaaccttgccagaatggaatctgcatcaataaccagggg
agttatcggtgtgagtgccagccagggttccagctacagacagacggacaaacttgtctg
gatacgaggcgcgggaactgctacctggagtacagacaaggtcgctgctctaacgcccta
gccatgcagatctccaagtcctcctgctgttgtatggacgacgacacccccaagggttgg
gggccaaggtgtgagctgtgcccaaggaaaggagacgccctatactcacagctgtgtagg
ggaactacagatgtgaatgaatgtatgctttatcccaatatctgtgaaaatggagcctgt
gaaaatctacaaggaacttacagatgtgtttgtgataaaggatttacaccaaatcccaac
agaaaaaagtgtctggatgttaacgagtgtgagaggtatcctgattactgtgatggtggg
aactgcaagaacactattggaagctttcactgtacctgtcccacaggcttcaggcttaac
cgagacaccacagcatgtgaagatataaacgaatgcctggataacaatccatgtgtcgga
ggcacctgtactaatattcctggaagcttcaggtgtgactgtcttgacccaggtacaaag
ctggacaccactggcagaatttgtctagataatagaaagggatcgtgttggctagagata
aacaatggacgctgtgagaacaatgccagggcactggtcactaagtccgagtgctgtgga
agtattggggtggcctggggtagcccctgtgaggagtgtcccctcgccccccagaggcag
tgccccacggggtatgccaccaacgatggcaagaattgtctggatataaatgagtgtgag
atgtttgccaacgtgtgtgaaggaggggggctgtgtgtcaacacccagggatccttccga
tgtaactgtccccctggactgattctggatgccacgggaagaagatgtatagacaaaaga
aagggcacctgttacctggaatactctagagggtcttgtcagcgaccagtagaaggcagc
tattccagggctacatgttgttgctccttaggcagagcctgggggacagactgcaccagc
tgccccaacagagactcagatgagttcaaacaactttgtgattcaacaaaacaaccagat
atcaatgagtgtttggagtttccaaacatctgtaaagatggcgtctgtagtaacacagtg
ggcagtttctcctgtcggtgtaaccaagggtacacactggacgaaaccgggaccacttgt
ctggatattaatgagtgccagatctctttcggtatctgcagcaatggaagctgtgtcaac
acccctgggatgttccgctgtcagtgtgatgagggattcaggccagtcatgatggaccag
atgtgtatggatatcgatgagtgtgaagagttgtcctccccttgtaagggaggctcctgt
ctgaatctgcccggaaccttcctgtgtgaatgtccaccgggactgatgttatctccggat
ggacagtcttgtcaggatattgatgagtgtggggacacgagcagtctgtgcagtaatggc
gtctgtgagaattacttgggaggataccagtgtcgctgtctggagggatactcccccaac
tctcaacacacctcctgtctagacattgatgagtgtgccacaggaaatggtggatgtcag
tcactgtgcttcaacaaacctggctctttctcttgtggttgtgagccagggtacctactc
atgcctgaccagaggtcatgtcaagacactgatgagtgtaaggaaataaaggacatctgt
agcggtggagtgtgtagcaatctgccaggatcacaccgctgtacctgtgtgggaggactc
gttccatctgccgacggaaaacaatgtctggatgtcaatgaatgtgcacagaatgctaac
atttgtctgcagggaacctgccacaatactcacggttcttatgaatgtatctgtgagcca
ggctactctgttaaaccggagtctagaaaccctgcctgcacagatgatgacgagtgcacc
agtggggaagctaactgtgacaggaatgccaagtgtatcaacacgctgggctcctacaag
tgtgactgtgtgccgggctactccggggacggatatacctgtcgagacagcaatgaatgt
actcggaacaacggaggctgttccatcgacgctgactgcatcaacctgccaggaagctac
aagtgtgtgtgtgaggaaggattcaaaggggacgggtacacctgtggggatgtggatgag
tgctctgtgaaccctgacctctgtcggtatggtaactgtatcaacttggctggcagttac
agatgtgaatgtgacatggggttcactcccacactggatggaaaggactgccgagatatt
gatgaatgtagctacttcagcaacctatgcatcaatggagagtgtgaaaatacactagga
atgttcaggtgtcgctgtaaccaaggttttaaacaggacgtgtcaggtggaaactgtaca
gatataaatgaatgtgacaatcctgacaactgtctgtacgggacctgtgtcaatgtgccg
gggagctacttatgtcagtgtcccccagagaaagttctcaacccaactggaacagcctgt
atagacaagcggcgaggtaactgttacctggaggtgggaaggcggggccgatgcagcaat
gtgattggttccgatgtttacagggccagctgttgttgttcctttgggcagggctggggg
gaggtgcccgggatgtgtgaaccatgccccctcaatggaacagctgaatatcaactactc
tgccccggggacccaggattgagaccagatgaagaaacaggaattcccattgacatagac
gagtgccaggagatagatgggctctgtgatggaggcgaatgtcagaacacatttggcagc
ttcttctgtgtctgtcctaagggacatcgactgctgaactacacctgtgtagatattgat
gaatgcattgagaatggcccgctgtgtggggcagggtcctgtctgaacaccaagggcagt
taccggtgtgtgtgtccggacggctatgtacttatggagggagagaccgactgcatggac
atgaggaaaggtaactgttattcgacctactacaccaccactgggcctggcccccaccag
tacatctgtgagaaccctctgtctcgtaacctgacccggaaccagtgctgctgtactgtg
atagggaaagcctggaactctccgtgtgagccctgccccgaggccaatacagaggattac
aacaaactctgtgaggtatcagctgttgtgaaagatattgatgagtgtaccttatttggg
gatgctatctgcaaaaatggccgctgcattaacacgaaggagagcttccgttgtgaatgt
aacccaggttacaagtatgatgtggacagtcacagttgttatgatgaggatgagtgccgg
cgcagtctcccgccctgtgtccccatcgctcagtgtgtgaacacacctggcagttacagg
tgtgagtgtccagcgggctacagtcttcatcagaacggacacagctgtcaagacatcaat
gaatgcaccatgttcccaggcgtatgtgctaatggagtatgtaggaatttagaagggagg
tttcggtgtttatgtaaccctggctaccgtctgactcagagcagggacgcctgcattgat
atagatgagtgtagtgcacagccaggcacgtgtaacaatggaacgtgtgaaaacactgac
ggacactacaggtgtcactgccatccgggattcagactgaccatcaaccaggactgtgaa
gacatcaacgagtgcctgacagaagtaggcctgtgtcaaaatggccgctgtgtcaacacc
atcggcaacttcacctgtcagtgtcagagtggctacatgatctcgccggatggccgcaca
tgtcaagatgttgatgaatgcacccttttcagggagatatgtggcaatggagagtgtcga
aacagtgagggatcctacgagtgtatctgtcacgagggctacgaactgaccagagcgaga
gatacctgcattgatatcaacgagtgtacctctgttaggggtatctgcgcggggggtcag
tgtaggaacctggaggggggctacagatgtgtctgtcctcctggactgttgctgacagct
gatggtcagaaatgcattgatgtcagaatgggaaactgtttcaacagattctacaatggt
cagtgtgtatccccccgcctgctcaacatgaccaaggctgactgctgctgtacccagggg
caggcctgggggagccgccaacagtgtgccgtctgccccacggaggacgaggctgaattt
aagacactgtgtcctgatggctatggaagagttgtggacccctcaggtggaatagtagat
gtaaatgagtgtgctgtcaatccaaacctgtgtgtcaatggcatatgtgtgaacacggac
ggttccttccgctgcgagtgtctggcagggtacaagctgggggctgatgggagaacatgt
gaagataagaatgaatgtgatgacagcccaggagtctgtggaaatggcacctgcaggaat
gtggtcggagggtttgagtgtttctgtagtccgggatttgaaccagggtccgacggcacg
tgcaaagatattgatgagtgcggtggtccccagaacaactgtgccttccgctgtgttaac
ctgccgggaacgttccaatgtgtgtgtcccaagggctttactctggccccggacaactcc
cactgccaggatgtggatgaatgtcagacgcgtgccaataattgtcgctatgcctgcaaa
aatttagtagggtcgttcatgtgtgtctgtccggaggggttcactggcactggggacaac
tgtagagatgtggatgaatgcagggatcccagagtgtgccaaccaggcaggtgtgtcaat
ttacagggagggtaccagtgcatgtgtcccccagggtactcccagagtctggacaggaag
cattgttacgaccagagagagggcacttgttaccaggagctgctgggaggcagatgtgtt
gcttccaacttctacagaatgaccaggcaggagtgttgttgctctggggcggcagcctgg
ggcccgtcctgcaacaggtgccccaccccgggaacaagacaatttcaagagctgtgtcca
gagggtattggcaaaacgccagatggaaaagacatcaatgaatgcctgaagtttccagga
atttgcggcaatggctactgcatcaacacccagggctcttataggtgtcgctgtaaccgt
ggttacaaaacggatatcacgagcacaaaatgtatcgatgtggatgagtgccgggaaggc
acgtcttcctgcgagtttgattgtgtcaacacggtgggcagctacacgtgttcctgtccc
aggggatatgtcctcaacagagatggcaaaacatgcagggatttggatgagtgtgccacc
atgcgacacagttgtcagcagatttgtacgaacactgaggggagctaccgctgcagctgt
aagacaggctacaggatggaggccaatcagtgcagagatatcgatgaatgcagagaagat
gtctcactgtgtacccctggtgggcagtgccacaacactcgggacggctacaaatgtgtg
tgtaaacgaggctacaaactggactccaccggcaaaaaatgcatagacataaatgaatgc
gagaatggccgatgtgatgatcgatgcgagaacatacctggatcgtacaagtgtatgtgt
cccccaggctacaaaccggtgtatggacagtgtatagatgagaatgagtgtctgacagac
gacatctgtggcctggcctcctgttacaatgtccccggctcctacaactgccagtgtgga
ccagggaccaactttgatccaaggctgatgacctgtctagaggccaatgtgtgtatgaat
gccccctgtttgtttggatgcaccctgtctggtccctcctttgtctgtggctgcccacct
ggttatcagaccctgggagttggccattgtgtcgcggtttccccagacagtggggcagga
ggatcgtttcccaccggcggcaacattcctcacgtcccgggcccagacacgggcaaactg
ccccagggagagggctgctttgagtgtgacataaaaaatcaagacattcctttgtctaaa
cgagcaaagagggcagtgcataatctgacaacctctgcagttggaggtatatcacataga
catcacctttctagaaagctacagcctgaagtagtgtcagaagttctgaaattctacata
aaaagaaaagacgtatatagaaagaagagactcataaccgtgcttccatcattgatcgcc
ttaaaaaataatgttaaataccacatactgcacggaaatgagaagaagatatttgtggtt
cataaaaaacatggcattagttctttacagtttaggaggaaagtccgaaaatcccgtgtc
tttaaattaacagttgaagccaagccaatacataaagaggagaaagtagcaggttcaaag
gtcatacttaggagaactcttttacatgtggaggtacatgtgttgtaa
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integrated database retrieval system