Crassostrea virginica (eastern oyster): 111129948 Help Entry 111129948         CDS       T09197                                  Name (RefSeq) protein NRDE2 homolog   KO K26109   nuclear exosome regulator NRDE2 Organism cvn  Crassostrea virginica (eastern oyster) Brite KEGG Orthology (KO) [BR:cvn00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cvn03019]     111129948 Messenger RNA biogenesis [BR:cvn03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      111129948 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  NRDE-2 HAT_PRP39_N DUF719 Motif Other DBs NCBI-GeneID:  111129948 NCBI-ProteinID:  XP_022332210 UniProt:  A0A8B8DWD1 LinkDB All DBs Position 4:complement(3232705..3242153) Genome browser AA seq 1114 aa AA seqDB search MNPLFPVSTTNSLFPVSLCSNDTASVTNPPEVKLDWLQNKSFTNIPCEVQKLQEQKEDST LIQEIPEFSDENSDNNEEKTESRKRKKKKKHKHKNKKKKSSKREISRSPSPTVKMKPRIM ENQGNKVFIEELPYLEPEDAFRIDRKSNIHNWKYESLYKGHIASFSNLFQYTLGGETILK GGETTMKDSKRKSKEKMKRYFSRENKVLTSQAPLSHLLPKKVPDNSPSDFLSVPLETHSN ENSSGKHVGVDVREKLMDENTSHYIRGEGVAKEEKNICLTETEQRLNRKTAEFNSRTRTE PHNIDMWLQFIEFQDFLFKYPESEGHFKITKAAVMEKKIAIMRKAMEVNPGNITLKLEYL QLCRGAMEAEEVNKEMEDLIFHNPTNITLWSQYLMFNQSRLVSFSVSRMCKVYQKCISTL VKYQEGSLQTHTLPENLSSEILGIFVKLCMFLKEAGHKERAVAAFQALIELNVFCPERLK SADRTDKIIILESFWDSGVPRFGEEGAKGWSFWMDNKDLLPSESERSWKEPLVDTEEQTI LQGKHAKWETWIQIETLRESVHWLPWKPNLSEGETMDDCEDVDRLVLFEDVSHFLFCVPE DMRYRLLSEFLTFLGFESYLLRDAEQENSKMMQIIDIFGLEDLKKSSFQEEKEFLHKFIG NIIQQGLVKFQGVHHTKLTTLLLRFQARNENSENTGFKKFKKTARNILKDPQNRNSKTVW LEYCHLLSNLGGQGDAVEVLETAIPMLCINNTVEKECVPAFYKNLVENILKIPVDNDMFK FSKKTVMINAELVKKCVHVLSCFCDSRHGDLKNLESTTAVIKLKSRKKLEELLNSLLQDY EKDTKRSEEEWMCFLATSQCCALFEYVFSDLNLDSALCVLNKAQCKFFTLSGAHTEDKDV NQKLDHCLEQIFQYKIRIIHYHMSVHHSSLSPLRETVEAALEIFPDHVYFLNVFTELEKG CMVFGRIDRFFGHYIGRVSSPVLTLFAVASLIQRQKQRMDLIYGDIETPQSFMSCNGLMN KIRSYLDKSLENPKTQHCSFLWNVYLYCERNYGQNERAGGLFYRSLQMCPWVKDLYLDGV NIFKDSKLEEITDLMLEKEIRVQIPLEEIDILQS NT seq 3345 nt NT seq  +upstreamnt  +downstreamnt atgaatccactgtttccagtttcaactacaaattctctttttccagtttcactgtgtagc aatgatacggcatcggttacgaatcctccggaagtgaagttagactggttacagaataaa agtttcacaaacattccctgtgaagtacaaaaattgcaggaacagaaggaagacagtact ttaatacaggaaattcctgaattttctgatgagaacagcgacaacaatgaagagaaaaca gaaagtagaaagagaaaaaagaaaaagaaacacaagcacaaaaacaaaaagaaaaaatct tccaaaagggaaatctcaagatctcccagtcccacagtcaagatgaaaccaaggataatg gaaaatcaggggaacaaggtgtttattgaagagttaccttatcttgaacctgaagatgcc ttcaggattgatcgtaaatctaatatccacaactggaaatatgaatcactctacaaggga cacattgcatctttttcaaatctatttcaatacaccttgggaggggagacgattttgaaa ggtggtgagacaaccatgaaagattctaaacgcaaaagtaaagagaagatgaagaggtat tttagcagagaaaacaaggtgttaacatcgcaagctccattgtctcatcttttgccaaaa aaggttcctgataattcaccaagtgattttctatcagttcctttggaaacacattcaaat gagaattcaagtggcaaacatgttggagttgatgtgagggaaaaacttatggacgaaaac acttctcattacataagaggagagggggttgcaaaagaggaaaagaacatctgtttgacg gaaaccgagcaaagactgaacagaaaaacagcagaatttaacagcagaacaagaacggag cctcacaatatagacatgtggttgcaattcatcgagtttcaagatttcttattcaaatac cccgagtctgaggggcattttaaaatcaccaaggcagctgtgatggaaaagaagatcgca ataatgaggaaggccatggaggtgaaccctggcaatataaccctgaagttagagtatctt cagctctgtcgaggggccatggaagcagaggaggtgaacaaagaaatggaggacttgatt tttcataatcccacaaatatcactctatggagtcagtacctgatgttcaaccaaagccga ttggtcagtttttcagtttccagaatgtgcaaggtttaccaaaagtgtatctcgaccctg gtgaagtatcaggagggaagtctccagacccacacacttcccgagaatctctcctctgaa atactgggtatatttgttaagctctgcatgtttctgaaagaagctggacacaaagagagg gcagtggctgccttccaagccttaatagagctcaatgtgttttgtcctgagcgactgaag tctgctgatcgcactgataagatcatcattctggagagtttctgggacagcggggtgcct cggtttggggaggagggagccaaagggtggagcttttggatggacaataaggacttactg ccctcagaaagtgaaaggagctggaaagagccattggttgatacagaggagcagaccatt ttacaaggcaaacatgccaaatgggagacatggatacagattgaaacccttagagaatca gttcactggttaccatggaaaccaaatttgtctgaaggagagaccatggatgactgtgag gacgtagacagacttgtgttatttgaggatgtctctcattttctgttctgtgtgcctgag gatatgaggtacagacttctctcagaatttctcacttttctgggatttgaaagctattta ctcagagacgcagaacaagaaaactcaaagatgatgcagatcattgatatctttggactt gaagatttgaaaaagtcaagttttcaagaagagaaagagttcttgcataaattcattggg aatataatccaacaaggattggtaaaattccaaggtgttcatcacactaaacttacaact ctcctgttaagatttcaggcacggaatgaaaattctgaaaatactggttttaagaaattc aagaaaacagctagaaacattcttaaagatccccaaaatagaaacagtaagactgtgtgg ctggagtactgtcatttgctatcaaatcttggtggacaaggggatgcagtagaagtgctt gagacagctatcccaatgctatgtataaacaacaccgtggaaaaagaatgtgtgccagca ttttataaaaatctagtggaaaatattcttaaaattccagtggacaatgacatgttcaag ttcagcaagaagactgttatgataaatgcagagttagtgaagaaatgtgttcatgtactg agctgtttctgtgatagtcgccatggcgacctgaaaaatttggagagtactactgctgtc atcaaattaaaaagtaggaagaaactggaggaattgttgaattccttactgcaggactat gagaaagacaccaaaaggagtgaggaggaatggatgtgttttcttgctacatcacaatgc tgtgctttgtttgaatatgtgttctctgatttaaaccttgattctgctctgtgtgtttta aacaaggcgcagtgtaaatttttcactctatcaggtgcacacactgaagacaaagatgtg aaccagaaacttgatcactgtttagaacagatttttcagtacaaaatcagaattatccat taccacatgtctgttcatcattcctcattgagtcctctcagagagactgtggaagcagca cttgaaatatttcccgaccatgtgtactttttaaacgtgtttacagaacttgaaaaagga tgtatggtgtttgggaggatagacagattctttggacattatattggcagagttagttcc cctgttttaactttatttgctgtagcatctttaattcagagacaaaaacagcgaatggat ctcatctatggagacattgaaactccacagtcctttatgagctgtaatggccttatgaac aagatcaggagctatctggacaaatcattggaaaatccaaagacacaacactgttccttt ctgtggaatgtatatttgtattgtgagagaaactatggtcagaatgagagagcaggaggc ttgttttacagatccctacaaatgtgtccatgggtcaaggacttgtacctggatggtgtg aatatttttaaagactctaaactggaggaaatcacagacttgatgttggagaaagaaatt agagtacagataccgctggaagaaattgacattttacaaagctga

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