KEGG   Crassostrea virginica (eastern oyster): 111129958
Entry
111129958         CDS       T09197                                 
Name
(RefSeq) ras-related protein Rab-1A
  KO
K07874  Ras-related protein Rab-1A
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111129958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111129958
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111129958
   04031 GTP-binding proteins [BR:cvn04031]
    111129958
Membrane trafficking [BR:cvn04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    111129958
 Autophagy
  Other autophagy associated proteins
    111129958
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111129958
  Exosomal proteins of other body fluids (saliva and urine)
   111129958
  Exosomal proteins of colorectal cancer cells
   111129958
GTP-binding proteins [BR:cvn04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    111129958
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase GTP_EFTU MMR_HSR1 SRPRB Gtr1_RagA FeoB_N AAA_7 ABC_tran DUF6043 AAA_16 DUF3873 Septin AAA_29 AAA_22 AAA_5
Other DBs
NCBI-GeneID: 111129958
NCBI-ProteinID: XP_022332225
UniProt: A0A8B8DWE6
LinkDB
Position
4:complement(55799583..55809237)
AA seq 248 aa
MRIHEGGSHIERRCTTKYLVFTQFYTRVLRKNCKRIISIRLHFMSTMNPEYDYLFKLLLI
GDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT
SSYYRGAHGIIVVYDVTDQESFSNVKQWLQEIDRYASENVNKLLVGNKSDLETKKVVDYT
TAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVISASQDNKPSVKINASNP
VKQSGGCC
NT seq 747 nt   +upstreamnt  +downstreamnt
atgcgcattcacgaaggaggaagccatattgaacgaaggtgtacgacgaagtatcttgta
tttacacaattttatacaagagttctgaggaagaactgtaaaagaattatctcgattcgt
ttacattttatgtccactatgaatccagaatatgattacctatttaaactgttgctgatt
ggtgactctggtgttggcaagtcttgtcttctcctgcgatttgcagatgatacatacaca
gagagttatataagtacaataggagtagattttaaaatccgaacaattgaattagatggg
aaaactataaagttacaaatatgggatactgctggtcaggagagatttcgaacaataaca
tccagttactacagaggggcccatggtattattgtggtgtatgatgtcacagaccaggag
tcatttagcaatgtgaagcagtggttacaggaaatagacagatatgccagtgaaaacgtc
aacaaattacttgtgggcaacaagtccgatttggagaccaagaaagtcgtagattacaca
acagccaaggagtatgctgatcaacttggaatcccgtttttggagaccagtgcaaagaac
gctacaaatgtggaacaagcatttatgacgatggcggcagaaatcaagaacaggatggga
ccagtcatttcagcctcacaggacaacaaacccagtgtcaaaattaacgctagcaaccct
gtcaagcaatctggagggtgttgttaa

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