Crassostrea virginica (eastern oyster): 111130083
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Entry
111130083 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-5-like
KO
K08490
syntaxin 5
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111130083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111130083
Membrane trafficking [BR:
cvn04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
111130083
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
111130083
NCBI-ProteinID:
XP_022332486
UniProt:
A0A8B8DZR9
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All DBs
Position
4:complement(44779961..44786964)
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AA seq
340 aa
AA seq
DB search
MIARRRRTNSGSDSKQNGISPQTSQTFVSEVILDTDMSCRDRTTEFFSAAKLLQSRQGNG
TLAQKRNPALRQRSEFTQIAKKIGRDLANTFAKLEKLTMLAKKKSLFDDKPVEIQELTYI
INQDIQSLNKQIAQLQQVARSHPNAKHVQSHSNSVVVSLQSKLATMSNDFKQVLEVRTEN
LKHQKSRRDQFSDQAMSNASYSNHSSVLFQDEMNHSQGATGGSDVXINMDSLDKNRFQQQ
MQLIDQQDDYIQGRADTMKNIESTIVELGGIFSQLAHMVKEQEEIVHRIDSNTDDAVLNV
EAAHSEILKYFQSVTSNRWLMIKIFAVLILFFIIFVVFMA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatagccagaagacgacgcaccaactcgggctctgattcaaagcaaaacggaatatca
ccacagacaagtcaaacatttgtatcggaggtcattttggacacagatatgtcttgtaga
gatagaaccactgagttcttttctgctgcaaaattattacagtcacgacagggaaatgga
accttggcacagaaaagaaacccagcactgcgacaaagaagtgaatttactcaaattgca
aagaaaattggtcgtgatttagcaaacacatttgcgaagctggaaaaactcacaatgttg
gccaaaaagaagtccttgtttgatgataagccagtggagattcaggagctgacctacatt
attaaccaggacatacagagtctgaacaaacagattgcccagctgcagcaggtggcccgg
tctcatcccaacgccaagcatgtacagagtcactccaactcagtggttgtctccctgcag
tcgaagcttgccaccatgtcaaatgatttcaaacaagttcttgaagttagaacagagaac
ttgaagcatcagaagtcaagacgagatcagttttctgatcaagcaatgtccaatgcttct
tacagcaatcacagttcagttttgtttcaagatgaaatgaatcattcccaaggagcaaca
ggaggatcagatgttngtataaatatggatagtctggataaaaacaggtttcagcagcaa
atgcaactgattgatcaacaagatgattatatacaaggaagagcagacacaatgaagaat
atagaaagcaccattgtagagctcggaggaatattttcacagttggcccacatggtcaaa
gaacaggaagaaattgtgcaccgaattgactcaaatactgatgatgctgttctgaatgtg
gaggcagcacacagtgaaattctgaaatactttcagtcagtgacatcaaatcgatggcta
atgatcaagatatttgccgtcctaatattgtttttcattatatttgttgtatttatggca
taa
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