Crassostrea virginica (eastern oyster): 111130098
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Entry
111130098 CDS
T09197
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic isoform X1
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00300
Lysine biosynthesis
cvn00470
D-Amino acid metabolism
cvn01100
Metabolic pathways
cvn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
111130098
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
111130098
Enzymes [BR:
cvn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
111130098
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
111130098
NCBI-ProteinID:
XP_022332500
UniProt:
A0A8B8DX54
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Position
4:13884630..13893870
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AA seq
541 aa
AA seq
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MITVLLVVLLNIDITPHGITFFLLKMEGPVLPPKNYQINRGFRFVDDYLYCEEIRVCDLL
SSKISGQTVATPLYVYSKKQIEANIDKYKMAMMRETERNIQLSYSVKANMNPTVIKLMMD
HGLFLTLVSGHELRLALQLGQDPQRIILNGSGKMDWEVELACKRGVLVNVDSAFNLRQTV
RICQQGGYVATVLLRVNPDINPDVHGYVSTGQEGSKFGIPGEELDDVLEMAVKSERIRVV
GLHCHIGSTLTDSHKFRQSTQVLVDLYQKIQKKFPEMQILNLGGGLSIPYKAQISLFEET
KQMLDLEFDKYKDQRILELYENLLNKRITLATFLESIKSLPHGIEICLKLREQLPAEVLV
PEPEDLVKSVCDILPLNTIAILEPGRSLVGNSAILLSRVLGTKSSGKRNFIVLDGSMTEV
IRPCLYGAYHHIELAEPSRIFSHVNSDNQLTIVSDIVGPVCESADFLGKDRQLVPPHTGC
LMAVFDTGAYCSSMSSNYNMRVRPAELLVDGDKATIIRKCETFENMMFCYTDCSQNSENE
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgataacagttttacttgtcgtgttgttgaatatagacataacaccacacggaattacc
ttctttttgttgaaaatggagggtccagttcttccgcccaagaactatcagatcaaccga
ggcttccgttttgttgatgattacttgtactgtgaagagattcgtgtatgtgatttgttg
agttcaaaaatttctggccagactgttgcaacgcctctctatgtctacagtaagaagcaa
attgaagctaacatcgacaaatacaagatggccatgatgagagaaactgaacgtaatatt
cagcttagttattccgtgaaagccaacatgaacccgacagttataaagctgatgatggac
cacggattgttcctaacactagtcagcggccacgagcttcgcctcgccctgcagttaggt
caggacccgcagaggatcatcttaaatgggagcggcaagatggactgggaggtggaactt
gcttgtaagcggggcgtcctcgtgaacgtggacagcgccttcaatctgcgccaaacggtc
aggatatgtcagcaagggggatacgtggccactgtgctcctcagagtcaaccctgatatc
aatccggacgttcacggttatgtatccactgggcaagaggggtccaagtttggaatccct
ggggaagagctcgatgatgtacttgaaatggcagtcaaatcagagagaatccgagtagtc
ggtcttcattgtcatattggttccaccctaacagattcccataaatttcgacaaagtaca
caagtcttggtggatctttaccaaaaaatacagaaaaaatttccagagatgcagatcttg
aatttaggaggaggattgtcaattccgtacaaagctcagatatcgttattcgaagaaaca
aaacaaatgctcgatctggagtttgacaaatataaggatcaaaggattttggagttgtat
gagaacctgcttaacaaaagaataacacttgccactttccttgaatctataaaatcactt
cctcatggaatagagatatgcctgaaacttcgagaacaactccctgcagaggttctagtt
cccgaaccagaagatttagttaaatctgtttgcgacatcctaccactgaacacgatagct
attttggaaccgggacgttcattggtcgggaattcagccattttattgtcacgtgtttta
ggaacgaaatcgtctgggaagagaaattttatagtactggatgggtcaatgacagaggta
attcgaccttgtttgtacggagcatatcatcacatagaattggctgagcctagcagaatc
tttagtcacgtgaacagcgacaaccaattaacgatcgtttctgacatcgttggtccggta
tgtgaaagtgccgatttccttggaaaggaccgtcaattagtgccaccgcacaccggctgc
ttaatggcagtgtttgacacgggcgcctactgcagctccatgtcgtccaactacaacatg
agggtacgacctgcagagctgcttgttgatggagacaaagcaacgattattcggaaatgt
gaaaccttcgagaacatgatgttctgctataccgactgttcccagaattctgaaaacgaa
agctga
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