Crassostrea virginica (eastern oyster): 111130105
Help
Entry
111130105 CDS
T09197
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00860
Porphyrin metabolism
cvn00970
Aminoacyl-tRNA biosynthesis
cvn01100
Metabolic pathways
cvn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
111130105
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111130105
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvn01007
]
111130105
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111130105
Enzymes [BR:
cvn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
111130105
6.1.1.17 glutamate---tRNA ligase
111130105
Amino acid related enzymes [BR:
cvn01007
]
Aminoacyl-tRNA synthetase
Class I (A)
111130105
Transfer RNA biogenesis [BR:
cvn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111130105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_1c_C
tRNA-synt_1c_C2
PepSY_2
GST_C
GST_C_3
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
111130105
NCBI-ProteinID:
XP_022332512
UniProt:
A0A8B8DW96
LinkDB
All DBs
Position
4:25954233..25977997
Genome browser
AA seq
1621 aa
AA seq
DB search
MALNVSFQKDKLPAAALLTAEYLSQKNLLKWSLGDTTALTVDGTTLNNNYTICRYLANKF
NDVGLYGSSILEASEVDHWMTFAQGSLSCASKFSTALTYLDKSLEPVTYIVGQSLTLADF
AIWEILQSSGKYQSLLASGDAGVNVTRYYKFLSNQPTFKVAQKQLPQVKASAEKKTDKKS
DQSAKKDEGKFVDLPGAEMGKVVVRFPPEASGYLHIGHAKAALLNYHYREMFKGTLIMRF
DDTNPAKENEEFEQVILKDVAMLGITYDKFSYTSDHFDLLQDLCEKMIKLGKAYVDDTEP
ETMKKEREERKDSVNRNNSVEKNLTMWAEMKKGTPKGQTCAVRAKIDMKSDNGCMRDPTL
YRCKLETHIRTGTKYKVYPTYDFACPIVDSVENVTHALRTTEYHDRDEQYYWILDALSMR
RPYIYEYSRLNLQYTVLSKRRLTWFVNEGVVDGWDDPRFPTVRGVLRRGMTVEGLKQFII
SQGSSKSVVMMEWDKIWAVNKKVIDPIVPRFTALLKEEAVPVHVKDASTGVMQKPKHPKN
EDVGMKDVWYSSLVYIEGADAELLKEGELTTFINWGNLEITKINKKVGKIVSMEATTRLD
NTDFKKTQKITWLAEADKAPFTPTVCVQYDHIISKAVIGKEEDFKQYANRDSKKELVMLG
DPCLTSLNKGDIIQLQRRGYYICDQPYLPTSPFTGRCSPCVLLNIPDGHTKEMPTSGSKH
KEAGSSKEKSQSKKGKAAEKSPPETPAPGVDLVDLDKRIRSQGERVRDLKAKKAPKEQVD
AEVKILLALKAEYKSGSGSDWKPDTKPVHPLSCAPPADVMNAQDLNDKITKQGNLVRDLK
GKKAPKGEIDEAVKVLLVLKAEYKNVTGSDWKPGVTPPATATPAASSGAEANIINEKIIA
QGNAVREMKAAKASKGEIDAAVKDLLALKAEYKAATGKEWKPSAVQSTPPPAAKSGNEAD
LNNRIVAQGNKVRDLKAQKAAKDKVSTEVQELLRLKAEYKTATGKDWTPPPAGSTPQKTE
PAKAMPVSGTEAENLKKKIDEQGEKVRQLKTSKAPENEVKKEVDTLLALKAQYKDLTGED
LAGGGRKDKKDKKKEKEKKPIEKPEEKKPQDESKDGKKVTRLGLEAKKEENLSDWYSQII
TKAELIEYYDVSGCYILRPWSYAIWESIKEFFDREIKKLGVENTYFPMFVSHAALEREKT
HIADFAPEVAWVTKSGKSDLAEPIAIRPTSETVMYPSYAKWIKSHRDLPLKLNQWCNVVR
WEFKHPQPFLRTREFLWQEGHTAFSTAQEAEEEVYVILDLYARVYEELLAIPVVKGRKTE
KEKFAGGDFTTTVEAYISASGRAIQGATSHHLGQNFSKMFEICIQDQETLEKQYVYQNSW
GLTTRTIGVMCMIHGDNKGLILPPNVACVQVIIVPCGITASLSKKDEQELMDKCEALKKE
LLAVDVRARTDLRDNYSPGWKFNHWELKGVPIRVELGPRDIKQNQLVAVRRDTAEKLTLK
NQNMAKQIQDLLKNIQESLFNKAKADLDNHLSVSHEWSHFCDSLDHKKIIQAPFCGDGDC
EDKIKKDSARDAVVEEGAPSMGAKSLCIPFKQPETLKPGTKCIHPDCKRDAKFFTLFGRS
Y
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaatgtgtcttttcagaaagataagcttcctgcagctgcactgctaacagca
gagtacttgtctcagaaaaatctattgaaatggtctcttggagatactacagctctgaca
gtagatggaactacattgaataacaactacaccatatgtcgatatttggcgaacaaattc
aatgatgtgggactgtatgggagctctatcctcgaagcatctgaggtagatcattggatg
acctttgcccaaggctcgttgtcctgtgcctccaagttttccactgctctgacctacctt
gacaaatcccttgaacctgtgacctacattgtgggacagtccttgaccttagcagacttt
gctatctgggagatccttcagagtagtggcaagtatcagtctctcctagcatcaggagat
gcaggtgtcaatgtcacccgttactacaagtttcttagcaaccagccaacatttaaggtc
gcccagaaacaactccctcaggtcaaggccagcgctgagaaaaaaactgacaagaagtcg
gatcaatctgcaaaaaaagatgagggaaagtttgtagatttaccaggagctgaaatgggg
aaagttgtggttcgttttccaccagaggctagtggatatttacatattggccatgctaaa
gcagccttattgaactatcactatagagaaatgtttaagggaactctcatcatgagattt
gatgataccaaccctgccaaagaaaacgaggagtttgaacaggtgattcttaaggatgtg
gcgatgttgggcattacgtacgacaagttttcctacacctccgaccattttgatctgctc
caggacttgtgtgagaaaatgatcaagctaggtaaagcttatgtggatgacacagaacca
gaaaccatgaagaaggagagagaggaacgcaaggactctgtcaacagaaataacagtgtt
gagaagaatttgacaatgtgggcagagatgaaaaagggaacccctaagggacagacgtgt
gccgttcgggcaaaaatagacatgaaatctgacaatggctgcatgagggatcccacactg
taccggtgtaagttggagacccacatccgtacaggcaccaaatacaaagtgtaccccacc
tatgactttgcctgccctatagtggacagtgtggagaacgtgactcacgctctcaggacc
accgagtatcacgaccgagacgagcagtactactggatcctggatgcactgagtatgaga
cgcccgtacatctacgagtacagtagacttaacctacaatacaccgtcctctccaagagg
aggctcacttggtttgtcaatgagggagttgtggacggatgggacgatcctcgcttccct
accgtcagaggggttctgagaaggggcatgactgtggaggggctgaaacagttcatcatt
agtcagggttcatctaaatctgtggttatgatggagtgggataaaatctgggctgtgaat
aagaaggtcattgaccccattgtgccccggttcaccgccctgctgaaagaggaggctgtc
ccagtccatgtgaaagacgcctcaaccggagtgatgcagaaacctaaacatccaaaaaat
gaagacgtaggaatgaaggatgtgtggtactcctccctggtttacattgagggtgctgat
gctgagctgttgaaggaaggggagctaacgacattcatcaactggggcaacttagaaata
accaagattaacaagaaagtgggcaagatagtttccatggaggctacaacaagacttgac
aatacagactttaagaagacccagaagataacctggctagcagaggctgacaaggctccc
ttcacccccaccgtgtgtgtccagtacgaccacatcatcagtaaagcggtcataggcaaa
gaggaggacttcaaacagtacgccaaccgagacagcaagaaagagctggtgatgttggga
gatccctgtctgaccagtctgaacaaaggggacatcatacagctccagaggcggggctac
tacatctgtgatcagccatacctgcccaccagtccttttactggtcgctgtagcccttgc
gttttattgaacatcccagatggtcatacaaaggagatgcccacatcaggatccaagcac
aaagaggctggaagcagcaaggagaaatctcagagcaagaaaggtaaagctgcagagaag
tcacccccagagacaccagccccaggggttgacctggttgaccttgacaagaggatcagg
agtcaaggagagagggttcgtgacctcaaggctaagaaagcccctaaggaacaagttgat
gcagaagtcaagattttgttggccctgaaggctgaatataagtccggctccggttcagac
tggaaaccagatacaaaaccagtccatcccctgtcctgtgccccacccgctgatgtcatg
aatgcccaagacctcaatgacaaaataacaaaacaaggcaacttggtcagagatttgaaa
gggaagaaagcccccaagggtgaaattgatgaggcagtgaaagtacttttagttctgaag
gctgagtacaaaaatgtcaccggaagtgattggaagcccggggtgacacccccagcaacg
gctacacctgctgccagcagtggggcagaggctaatatcatcaacgagaaaattatagct
caagggaatgcagtcagggaaatgaaggccgccaaagcctcaaagggtgagattgatgct
gcagtgaaagatctgctggctctgaaggctgaatacaaagctgccacaggaaaagaatgg
aagccctcagctgtccaatcaactccccctcccgcagcgaagtctggaaacgaagctgac
ctgaataacaggattgtagcccaggggaataaagtccgagatctcaaagcacaaaaagcg
gccaaggataaagttagcactgaggtacaggagttactgaggctaaaggcagagtacaaa
actgccactggtaaagactggacaccacctcctgcaggatccacccctcagaaaacagaa
ccagctaaagccatgccagtcagtggcacagaggcagaaaatctcaagaagaaaatagat
gaacagggagagaaagtgaggcaactcaagacctccaaagcacctgagaatgaagttaaa
aaagaagtagacacccttttggctctgaaggctcagtataaggatctaacaggggaggat
ctggcaggagggggacggaaagataagaaggataagaaaaaggaaaaggaaaagaaacct
attgagaagccagaggaaaagaaaccacaggacgagtccaaggacggcaagaaggtcaca
agacttggtcttgaagcaaagaaagaggagaatttatctgattggtactcacagatcatt
acaaaggctgagttgattgagtactatgatgtcagtggctgttacatcctccgcccctgg
tcatatgccatttgggaaagcattaaagagttctttgatagagaaatcaagaaactagga
gtagaaaacacttattttcccatgtttgtttctcatgctgcactggagcgagaaaaaaca
cacatcgcagattttgcaccagaggtagcgtgggtaacaaagtcgggtaaatctgacctg
gccgaacccatagccattcgtcccaccagtgaaactgtgatgtatccgtcttatgccaaa
tggatcaagtcccatagagatcttccactaaagttgaaccaatggtgtaatgtggtgagg
tgggaattcaaacacccacagcccttcctgaggaccagggagtttctgtggcaggaggga
cacacggcgttttccacggcccaggaggcggaggaggaggtttatgtgatacttgacttg
tatgccagagtgtacgaagagttgctggctattcccgtcgtcaaaggtagaaaaacagag
aaggagaagttcgctggtggagattttaccactacagtagaagcctacatatcagccagt
gggagagctatacagggtgcaacttctcatcatttaggtcagaatttctccaagatgttt
gaaatctgtattcaagaccaggaaacactggagaagcagtatgtgtaccagaactcttgg
ggactgaccactcgcaccattggagtgatgtgcatgatccacggagacaacaaagggctg
attctgccaccaaatgttgcctgtgttcaggtgataattgttccctgtggaatcacagcc
agtctgtccaaaaaagatgagcaggaattgatggataaatgtgaagcattgaagaaagag
cttttagctgtggatgtccgagccagaaccgatctgagagacaactactcccccggctgg
aagtttaatcattgggagctcaagggggttccaatccgtgtggagcttggacctcgtgac
atcaaacagaaccagcttgtggcagttaggagagacactgcggagaaactgacactgaag
aatcagaacatggctaaacagatccaagatctacttaaaaacatccaggagagtctcttc
aataaagccaaggctgatctggacaatcacctgagcgtctctcacgagtggagccatttc
tgtgattccttggaccacaaaaaaatcatccaggctccattttgtggagatggggattgc
gaggacaagatcaagaaagacagtgctagggatgctgtggtagaggagggggccccttcc
atgggagccaagagtctttgtatccctttcaaacagccagagaccctgaaacccggcacc
aaatgcatccacccagactgcaagagggacgccaagttctttactctgtttgggagaagc
tactaa
DBGET
integrated database retrieval system
