Crassostrea virginica (eastern oyster): 111130227
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Entry
111130227 CDS
T09197
Name
(RefSeq) ras-related protein Rab-1A
KO
K07874
Ras-related protein Rab-1A
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111130227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111130227
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111130227
04031 GTP-binding proteins [BR:
cvn04031
]
111130227
Membrane trafficking [BR:
cvn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
111130227
Autophagy
Other autophagy associated proteins
111130227
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111130227
Exosomal proteins of other body fluids (saliva and urine)
111130227
Exosomal proteins of colorectal cancer cells
111130227
GTP-binding proteins [BR:
cvn04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
111130227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
GTP_EFTU
MMR_HSR1
SRPRB
Gtr1_RagA
FeoB_N
AAA_7
ABC_tran
DUF6043
AAA_16
DUF3873
Septin
AAA_29
AAA_22
AAA_5
Motif
Other DBs
NCBI-GeneID:
111130227
NCBI-ProteinID:
XP_022332720
UniProt:
A0A8B8DWE6
LinkDB
All DBs
Position
4:59417183..59423698
Genome browser
AA seq
248 aa
AA seq
DB search
MRIHEGGSHIERRCTTKYLVFTQFYTRVLRKNCKRIISIRLHFMSTMNPEYDYLFKLLLI
GDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT
SSYYRGAHGIIVVYDVTDQESFSNVKQWLQEIDRYASENVNKLLVGNKSDLETKKVVDYT
TAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVISASQDNKPSVKINASNP
VKQSGGCC
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcacgaaggaggaagccatattgaacgaaggtgtacgacgaagtatcttgta
tttacacaattttatacaagagttctgaggaagaactgtaaaagaattatctcgattcgt
ttacattttatgtccactatgaatccagaatatgattacctatttaaactgttgctgatt
ggtgactctggtgttggcaagtcttgtcttctcctgcgatttgcagatgatacatacaca
gagagttatataagtacaataggagtagattttaaaatccgaacaattgaattagatggg
aaaactataaagttacaaatatgggatactgctggtcaggagagatttcgaacaataaca
tccagttactacagaggggcccatggtattattgtggtttatgatgtcacagaccaggag
tcatttagcaatgtgaagcagtggttacaggaaatagacagatatgccagtgaaaacgtc
aacaaattacttgtgggcaacaagtccgatttggagaccaagaaagttgtagattacaca
acagccaaggagtatgctgatcaacttggaatcccgtttttggagaccagtgcaaagaac
gctacaaatgtggaacaagcatttatgacgatggcggcagaaatcaagaacaggatggga
ccagtcatttcagcctcacaggacaacaaacccagtgtcaaaattaacgctagcaaccct
gtcaagcaatctggagggtgttgttaa
DBGET
integrated database retrieval system