Crassostrea virginica (eastern oyster): 111130234
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Entry
111130234 CDS
T09197
Name
(RefSeq) DNA repair protein XRCC3-like
KO
K10880
DNA-repair protein XRCC3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111130234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111130234
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
111130234
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
ATPase
DnaB_C
AAA_25
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
111130234
NCBI-ProteinID:
XP_022332729
UniProt:
A0A8B8DZ14
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All DBs
Position
4:31526680..31530890
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AA seq
341 aa
AA seq
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MSTVEDLDINPRIKTSLKKVGLTTFGQILTLSIQDIQRLGKLSQGEVTGVKTAIAQQVVC
HPNITALDIQRGTEKCPKDLKIVKLSTGCQQIDEALRGGILTQGITEISGESAAGKTQLC
LQLCITVQLPREQGGLSGGAAYICTEDAFPSKRLGQMISFFKQRSAEHQQVAFGDNIFIE
HIPDLDALNSCIHQKLPHLLSGGSVKLVIIDSVAALFRCDFELKDMYRRSKHMASLAASL
QQLSSKYCLPIVCVNQVTDSMTSTDKKTIPALGLAWSNQLTCRLSLSRTGREVDLPKRTL
SGALIGGFSTSVRSLEVVFAPHLPNITLMYVIDQEGIKALT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgttgaggatttggatataaatccaagaatcaaaacatctctgaaaaaagtt
ggactgacaacctttggacaaattttgaccctatccatacaagatatccagagacttggt
aaattaagccagggagaggttacaggggtgaagacagcaattgcccagcaagtagtatgc
catccaaacataactgctctggatattcagagagggacagagaaatgtcctaaagatctg
aaaattgtgaagctttcaacaggctgccaacagattgatgaggctcttcgaggtggaata
ctgacccagggcatcaccgagatatcgggagagagtgctgcgggcaagacccaactgtgc
ctccagctctgtatcacagtacagttaccacgagaacaaggaggcctttcagggggagca
gcctacatttgtacagaggatgccttccccagcaagaggctgggtcaaatgatcagcttc
ttcaaacagcggtctgcagagcaccagcaggtggcctttggagataacatctttattgag
catattccagacttggatgctctgaactcatgtatacatcagaagttacctcacctttta
tcaggcggaagtgtaaaacttgtgatcattgattctgtagccgcattgtttcggtgtgat
tttgaattaaaggacatgtacagacgttctaaacacatggcatcacttgctgcaagtctc
caacagctcagctccaagtactgcctccccattgtgtgcgtcaatcaggtgactgattct
atgacgagtacagataagaagacgatcccagcccttggcctggcgtggtccaatcagctc
acctgtagactgagtttgtctcgcacagggcgggaggtggacctacccaaacgcaccctc
tctggggccctgataggggggttctccacctcagtgaggtccctagaggttgtgtttgcc
ccccatctcccaaatatcacattgatgtatgtcatagaccaggagggcatcaaggcttta
acataa
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