Crassostrea virginica (eastern oyster): 111130325
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Entry
111130325 CDS
T09197
Name
(RefSeq) protein argonaute-2-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111130325
03036 Chromosome and associated proteins [BR:
cvn03036
]
111130325
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111130325
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111130325
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111130325
microRNA pathway
RISC loading complex
111130325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
111130325
NCBI-ProteinID:
XP_022332948
UniProt:
A0A8B8DZG3
LinkDB
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Position
1:24228355..24248087
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AA seq
917 aa
AA seq
DB search
MFPITPGIAGLVTQQLNVANHGMCGDPAPNGILSTDIRSPQLSFGPFTSVPPPELIYEAP
PHPADQPPPTPQPPSNGNAGEFVCPLRPDHGREGKPIALRANHFHVNIPKGFIHHYNVAI
TPDKCPRRVNREIVETMVNAYTPRIFSGQKPVFDGREKLYSREPLPFGKDRVELEVTLPG
EGRDRVFKVAIKWVSQISLYSLEEALEGRARRIPECAVEALDVIMRHLPSMIYTPVGRSF
FSPPEDYDYPLGGGREVWFGFHQSVRPSHWKMMLNIDVSATAFYKAQPVIDFMCEILELK
DAHEQRRPLTDSQRVKFTKEIRNLKVEITHCGTMRRKYRVCNVTRRPAQTQSFPLQLDSG
QTVDCTVARYFLERYKMKLQHPHLPCLQVGQEHKHTYLPLEVCNVVGGQRCIKKLTDLQT
ATMIRATAKNAPDREKEINNLVKKASYNADPHLRTFGITVNPQMMDLHGRVLSHPKLQYG
GATKAQALPNQGVWDMRGKQFYFGIEIRVWAIACFAPQRSVREDALRNFTQQLQKISTDA
GMPILGQPCFCKYATGPDQVEPMFRYLKNTYAGLQLIVVVLPGRTPVYAEVKRVGDILFG
LATQCVQSKNVNKTSPQTLSNLCLKINVKLGGINNILLPSSRPLVFREPVIFLGADVTHP
PAGDTSKPSIAAVVGSMDAHPSRYSATVRVQEHRKEVIEEFCSMVRELLISFYKSTLFKP
TRIIIYRDGVSEGQFQKVLAHELRAVREACMKLEIGYQPGITFIAVQKRHHTRLFCADRK
DQIGRSGNIPAGTIVDVGITHPTQFDFYLCSHAGIQGTSRPSHYHVLWDDNCFKADELQQ
LTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSRHSDEMERNPSAM
ARAITVHPDTVKVMYFA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctattacaccaggtatagccggcttagtcacccagcaactgaatgtggcaaac
catggtatgtgtggtgacccggcaccaaacgggatcctctccaccgacatacgctccccc
cagctctcctttgggccgtttacctcagtccccccgccggaactgatttatgaggcccca
ccacatcccgctgaccaaccgccacccactcctcagcccccctccaatggaaacgccggc
gagtttgtctgtcccctgcggccggaccacgggcgggagggaaagcccattgctctgcgg
gccaaccatttccacgtcaacatcccgaaagggttcatccatcattacaatgtggccatc
acaccggacaaatgtcccagacgcgtcaatagagagattgtggagaccatggtgaatgct
tacaccccgcgcatcttctccgggcagaagccggtgttcgacggcagggagaagctgtac
agtcgcgagcccctcccttttggcaaagaccgggttgaactggaggtgactttgccgggt
gaaggtcgtgaccgggtgttcaaggtggccattaagtgggtgtctcagatcagcctgtac
tctctggaggaggctctggaggggcgggccaggaggatccctgagtgtgccgtcgaggct
ctggatgtcatcatgcgtcacctgcccagcatgatatacacacctgtgggtcggtcgttt
ttctcccctcccgaggactacgactaccccctgggtggggggagggaggtgtggtttggc
ttccatcaaagtgtgagaccctcccactggaaaatgatgctcaacattgacgtgtcagcc
acagctttctacaaggcccagcccgtcatcgacttcatgtgtgagatcctggagctaaag
gatgcccacgagcagcgccgacctctgaccgactcccagcgggtcaagttcaccaaggag
atcagaaatttaaaagtagaaattacccactgtggaaccatgaggagaaagtaccgagtg
tgtaacgtcacacgccgccctgctcaaactcagtcgtttccgctgcagctggactcgggc
cagacggtggactgtacggtggcccgctacttcctggagaggtacaagatgaagctacaa
cacccacacctgccctgtctacaggtgggacaggaacacaagcacacctatcttcctctg
gaggtttgtaacgtggtagggggacagaggtgtatcaagaagctgacggacctccagacg
gccaccatgatcagggccacggcaaagaatgcccccgacagagagaaggagatcaataat
ttggtgaagaaggctagttacaacgcggacccccacctgaggacgtttgggatcacggtc
aacccccagatgatggaccttcacggacgagtcctgtctcaccccaaactgcagtacgga
ggggcgaccaaagctcaagctctgccaaaccagggggtgtgggacatgagggggaagcag
ttctactttgggatcgagattcgggtgtgggccattgcctgcttcgccccccagcggagc
gtacgggaggatgccctcagaaacttcacccagcagttacagaagatctccacggatgcg
gggatgccgattctgggtcagccctgcttctgtaagtacgccaccggaccagaccaggtg
gaacccatgttccgctacctgaagaacacctacgccggcctccaactgatcgtggtcgtg
ttaccgggccgcacaccagtttatgctgaggtgaagcgtgttggggacatcctctttggt
ttggccacgcagtgtgtacagtctaaaaacgtcaacaagacctcaccccagacattgtcc
aacctgtgtctgaagatcaatgtcaagttagggggcatcaacaacatcctcctgcccagc
tccagacctctggtgtttcgggagccggtcattttcctgggagctgatgtgacccaccct
ccagccggggacaccagtaaaccctccatagccgccgtggtggggagcatggacgcccac
cccagtcgttactcggcaaccgtgcgcgtccaggagcaccgtaaggaggtgatcgaggag
ttctgctccatggtgagggagctgctcatctccttctacaagtccactctgttcaagccc
acgcgtatcatcatctacagagacggtgtcagtgaggggcagttccaaaaggtgcttgct
catgagctgcgagctgtgagggaggcctgcatgaagctggagatcggatatcagccggga
atcaccttcattgccgtccagaaacgccaccacaccaggctgttttgtgctgacaggaag
gaccagatcggacgcagcggaaacatcccggcgggaaccatagtggatgtcggaatcacc
caccccactcagtttgatttctacctatgcagtcatgctggaattcagggcacaagcaga
ccctctcattatcacgtgttgtgggacgataattgtttcaaggcagacgagcttcagcag
ctgacctatcagctgtgtcacacctacgtcaggtgtacgcgcagtgtctccatccccgcc
cccgcctactacgctcacctggtggccttcagggcccggtatcacctggtggaaaaggaa
cacgacagtggagaagggagtcgacactcggacgagatggagaggaacccttcagcaatg
gctcgcgctatcacagtccaccctgacaccgtcaaagtcatgtactttgcctag
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