Crassostrea virginica (eastern oyster): 111130416
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Entry
111130416 CDS
T09197
Name
(RefSeq) SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
cvn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111130416
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111130416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111130416
Spliceosome [BR:
cvn03041
]
Complex B
Other components
Prp19-related factors
111130416
Complex C
111130416
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
111130416
NCBI-ProteinID:
XP_022333193
UniProt:
A0A8B8E061
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Position
4:50980998..50985711
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AA seq
534 aa
AA seq
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MAMKLSDILPAPSQHVFDREDDEQQQRAQTQMMPVMSRRTAPPYGHRKGWVPRTQDDFGD
GGAFPEVPVAQFPLGMGQKKSTSNALAVQLDSSGKIKYDAIARHGHGKDKVVHSKFQDLV
PKQIDEDDPDMQIPDEEAVMDTTEKTRQALEKLVSTKISAALPVRAAEKQAPAQYIRYTP
SQQGVAFNSGAKQRIIRMVEAQKDPMEPPKFKTNKKIPRGPPSPPAPVMHSPNRKVTVKE
QQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQGVHINENFAKLAEALYIADRKAREA
VEMRAQIDRKIAQREKEKKEATLRQLAQKARDERAGIKSHDNDEVAERDEIRRDRQKERQ
RDRNLARAAPDKRSRIQRERERDISEKIALNMPDARAGGSGEVQFDQRLFNQSKGMDSGY
GDDEAYTVYDQPWRKDHSQIANNIYRPSKNVDKEIYGDDLDTIMKSNRFVPDRGFAGTDR
NARREGPVQFEQEEEDPFGLGQFLEKAKRGDKRSADDSRSSRDYESSKSKKRRE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaaattatcagacatattgccggctccaagccagcatgtatttgatagagag
gatgatgagcaacagcagagggctcaaacacagatgatgcctgttatgagcagaagaaca
gctccgccatatggacacagaaaaggttgggttccaaggacacaagatgattttggagat
ggaggagcatttccggaagttcctgtggcacagtttcctttgggaatgggacaaaagaag
tccacatcaaatgcgctggcagtacagcttgacagtagtggaaaaatcaaatatgatgcc
attgctagacatggccatggaaaagacaaggttgttcactccaaatttcaagatctggtt
ccaaaacaaatagatgaggatgatccagatatgcagatacctgatgaggaagcagtgatg
gacacaacagaaaaaactaggcaggccctagaaaaacttgtgtctaccaaaatatcagct
gctcttcctgtccgagcagccgaaaaacaggctccagcacagtatatcagatacactcca
tctcagcaaggtgtagcatttaattctggagcaaaacagagaataattcgcatggtggaa
gcacagaaagatcccatggaacctccaaaatttaagacaaacaagaaaatccccagggga
cctccctctcccccagcacctgtcatgcactcgcccaacagaaaggtcacagtaaaagaa
cagcaagaatggaagattccaccatgcatctcaaattggaaaaatgctaagggttacaca
atcccattggacaaaagattggcagcagatggaaggggtctgcaaggtgtacatatcaat
gaaaattttgccaaacttgcagaggctttgtacatagcagacaggaaggcaagagaagct
gtagaaatgagagcacagattgacaggaagattgctcagagagaaaaggaaaagaaagag
gcaaccctcagacagctggctcagaaagccagggatgaaagagctggcattaaatctcat
gataatgatgaagttgcggagagagatgaaatcagaagagacagacaaaaagagagacag
agggacagaaatttggcaagggctgcgccagacaagagatcacggatacaaagagagaga
gaaagggacatcagcgagaaaattgcattgaacatgccagatgctagagcaggggggagc
ggggaggtccagtttgatcaacgtctatttaaccagtctaaggggatggatagcggttat
ggggatgacgaggcctacactgtttatgaccagccatggaggaaggaccactcacagatt
gctaacaacatctacagaccctccaagaatgtggacaaggagatctacggagacgatctg
gacacaattatgaagtccaacaggtttgtaccagaccgaggctttgccgggacagacaga
aatgccaggagagagggacctgttcagtttgagcaagaggaagaggatccctttggtctc
ggacagttcttggagaaggccaaacgaggagacaaacgaagtgccgatgactcacgttct
agcagagactatgaaagcagcaaaagtaaaaagagacgagagtag
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