Crassostrea virginica (eastern oyster): 111130534
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Entry
111130534 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111130534
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvn04812
]
111130534
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111130534
Intermediate filaments
Intermediate filament-binding proteins
111130534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
111130534
NCBI-ProteinID:
XP_022333390
UniProt:
A0A8B8DZJ7
LinkDB
All DBs
Position
4:complement(10613875..10640698)
Genome browser
AA seq
2463 aa
AA seq
DB search
MTEIEQYSNGVRWESGMDEDFDPGSNSSKLFERSRIKALADERESVQKKTFQKWVNSHLI
RMSCRIQDLYIDLRDGKMLMKLLEILSGERLPRPTKGKMRIHCLENVDKALQFLHEQKVH
LENMGAHDIVDGSPRLTXGLIWTIILRFQIQDITVEETDNSETKSAKDALLLWCQMKTAG
YPNVNVRNFTTSWRDGLAFNALIHKHRPDLIQYDKLQKSNALYNLNNAFEVAEEKLGLTR
LLDPEDCNVEFPDEKSIITYVVTYYHYFSXMKAESVQGKRIGKVIDHALDSDKQVQDYET
FTSDLLEWIEQTIVILNDRQFANSLYGVQQQLAAFNTYRTKEKPKKFDEKGNLEVLLFTL
QSEMRANNQKPYLPKEGKLISDINKAWDXLEKAEHERELALREELIRQEKLEQLAARFDR
KAGMRETWLSENQRLVSQDNFGNDLAAVEAATKKHEAIETDINAYEERVQAVVSVCFELE
QERYHDIERINARKENVMRLWKYLLELLRARRMRLEMSLSLQKIFQEMLYILDWMEEIKA
RLMSEDYGKHLMSVEDLLQKHSLLEADIHVLGERVKTVNTSAMKFVDGDAVESVGYHPAD
PKEVRERMKTLEDAYEELVRLAAERRDRLEDSRKLWQFYWDMADEEGWIKEKEQLMSSPD
LGRDLTSVHLLLNKQKQMEDEMTARHTHLQSVLQVGYDLITAGNFGAEKXQERIDEINQK
WESLIDLAAFRKKRLNEAVDYYQFFADADDVDAWMFDIFRIVSSEDVGKDEASVQSLLKK
HKEVTDELKNYESTLAALHEQAANLGEQDRESPDIQNRLGSIDHRYQELLELAKLRKQRL
LDALSLYKLFNEADGVETWIDEKEKFLTTMIITDDIEEIAIMKHRFDSFEHEMNATASKV
AVVNQLARQLLQIEHPGAAEVISRQNQLNGGWNNLRDLVDQKREEINXSHGLQNFHIECN
ETISWIHEKAKVIESTDEXGNDLSGVMTLQRRLSGMERDLAAIQAKVSXIPQGEAEKLQD
TKPEEAQVIREKIAEINNVWMDLKDMLRERDEKLGEAGELQRFLGNLDHFQQWLSRTQTT
VASEDIPNSLADAEKLLNQHQQLKDEIDAYAPEYAKMKEFGEKVTEGQEDPQYMFLRQRL
QALDSGWEELLQMWENRQQLLSQSLNLQMYLRDAKQAEVLLNQQENFLSKEEVPSSLGLL
DKQNTLEAAENLIKAHEAFITTTDANDEKINAVLQFANRLIEDQHYAADKVHKKAENISE
RRDVNRQRAYEQLERLKDQLLLQQFLQECDELRDWLHDKMAAAQDETYRDAKNLHSKYLR
HQAFEREXAANKERLQRLMESGEGLMQEKPECREQIAPILSSLQEQWDELEGTTKSKAER
LFDANRAVIYQQSCDDIDGWIEQLETQIITAEEGARDLTTVNLLMQKQHQLESQMKMKEG
QVAELDEQAVILKKVDPQQESMIEARKALVAERFSKIQEPLIKRREQLEKVKRIHQFVRD
VEDEKIWISEKMPLATSNNFGNSLLSVQLLTKKNHSLQTEIENHEPRIFNVVEVGQQLID
EKHPQSEEFQALIDELMKMWDDLRQAIVQRDERLKLSDTAQQYYYDASEAEAWMSEQELY
MLGEERAKDEIGAQNFLKKHQALENAVVDYADVVRQLGERSRNLIADEHPESDQIAVRQS
QVDKLYAGLKDLSNERKSKLEEVLKLYVLNREIDDIMQWIAEKEIVAGSHELGADFEHVC
MLQDRFREFAXETESIGTERVTAANDNCDALIMADHSDSAQIAEWKDNLNEAWNDLLELM
DTRTQMLQSSWELHKFYHDCKDILERILVGSXKKNYIPDDLGRDAQSVAALQRKHNNFEN
DLVTLGNQVQAIQEDSNRLQTGYAGDKKGEIQDREAEVVNAWKNLNLMVNSRRIKLADAH
DLFKFFNMVRDLILWMDDIIRQMKTQEKPRDVSGVDLLINNHQSMKAEIDAREENFAICI
NLGKALLERNHYRSDEVREKLIQLTTERQDMNDQWADRWEHLQLILEIYQFARDASVAEA
WLMAQEPYLQNQDFGDTLDAVENLIKKHEAFEKSAATQEERFSALEKLTTFEIKEQKKQT
EEQMDIAKEREEKRRQLIAEFLPPEKPPTPEPEVVESIQVPVQETAPQAEAVQRASAASE
EPQGASEDGSHTLPKPKRRDDSSLDDSAFSTESSEQVSESSSAPETRADRPKPRPRPSKE
ESPPTKSKTPEGRASDPSRGKKPIRQEQMSEITREPLRGXEMARLSPYDLPMSTKDKKRS
RSLSPFRKLFSRKRDRGRSKTDVIVLEELPSTSAESIHHEGTLTRKHDWEHENKKASNRS
WDKVYVVLNGNLLSCYKDKKIAKQDPNNLIHHEQPINLSGAQCFRATDYTKRPHVFRLKL
TTRGEYLFHAKDDGEMDLWIQKVISVTGAEGTSVPSKSMTLPARMEGEKEGKKKKGFLTM
KKK
NT seq
7392 nt
NT seq
+upstream
nt +downstream
nt
atgacggagatcgagcagtacagcaatggggtgaggtgggagtcgggaatggacgaagac
tttgatcctggaagtaactcatccaaactctttgagaggtcaaggatcaaggccttagca
gatgaaagagagtctgtacagaagaagacatttcaaaaatgggtgaattctcatttgatt
cgaatgagttgtcgaattcaggacctttacatagaccttcgagatggaaagatgctgatg
aaactactggaaattctgtctggggagagactgcctcgtcccaccaaaggaaaaatgagg
attcactgtctggaaaatgtggacaaagcattacaatttttacatgaacagaaagtgcac
cttgagaacatgggtgcccatgatatcgtggatggcagcccacgtctcaccnttggtctc
atctggaccatcattctccgatttcagatccaagatattacagtggaagaaactgacaac
agtgagacaaagtcagctaaagatgctcttcttctgtggtgccagatgaagactgcggga
taccctaatgttaacgttcgtaacttcaccacaagttggagagatggcctggccttcaat
gcccttattcacaaacacagacccgacttgatccagtatgacaagctacagaaatccaat
gccctgtataatcttaacaatgcttttgaagtggctgaggagaagttggggcttacccgg
ctcttggatccagaggattgtaatgtcgaattcccggatgagaaatccatcatcacctat
gttgtcacatattatcattacttctccnaaatgaaggcagaatctgtgcagggcaagaga
attggaaaggttattgaccatgccctggattccgacaaacaagtccaagactacgaaact
ttcacctctgacctcttggagtggattgagcaaaccattgtcattctgaatgaccgacag
tttgctaactccttgtatggtgttcagcagcagttagcagccttcaacacctacagaacc
aaggaaaaacccaaaaagtttgatgaaaaaggcaatttagaagtcttgctatttacactg
caaagtgagatgcgtgcaaacaaccaaaaaccatacctgcccaaagaaggaaaattaatt
tcagacataaacaaagcttgggacnggctggaaaaggcagaacatgagagagaactggcc
ctcagagaggaactcattaggcaagagaaactggagcagcttgctgcacggtttgacagg
aaggcgggcatgagagagacctggctgagtgagaaccagaggctggtgtcacaggacaac
ttcggtaacgacctggctgcggtggaggctgccaccaagaaacacgaggccatcgagacg
gacatcaacgcttacgaggagagggtccaggctgtcgtgtctgtctgttttgaactggaa
caagaaagataccatgatattgaaagaatcaatgcaaggaaagaaaatgttatgaggttg
tggaaatatttactggagcttttgagagcaagacgaatgagacttgaaatgtccctcagt
ctacagaagatcttccaggaaatgttgtacatcttagactggatggaagaaatcaaggct
cgtctgatgtctgaagactacggaaaacatctgatgagtgttgaggacttgctacaaaaa
cacagtctgctggaggctgacatccatgttctcggagaacgagtcaagactgtcaacaca
tcagccatgaaattcgtggatggagatgctgttgaatctgtaggctaccacccagcagat
cctaaagaagtgcgagagagaatgaagactttagaggatgcctatgaagagctggttcgc
ttggctgcagagagacgagacaggcttgaagactcgcgtaaactgtggcagttctactgg
gacatggctgatgaggagggctggatcaaggagaaggaacagctgatgtcctccccagat
ctgggcagagacctcaccagtgtccatctactgctcaacaaacaaaagcaaatggaggat
gagatgacagcccgacacacccatctacagtccgtgctacaggtgggctacgacctcatc
actgccggaaactttggggcagagaaantccaggaaaggatcgatgagatcaaccagaaa
tgggaaagtctcattgacctggcagccttcaggaagaagaggcttaatgaagcagtggac
tactaccagttctttgctgatgctgacgatgttgatgcctggatgttcgacatcttccgt
attgtttcaagtgaagatgttggcaaggatgaggccagtgtacagtcacttctgaagaaa
cacaaggaggtcacagatgagcttaagaactatgaaagtactctggcagcccttcatgaa
caagctgccaacttgggagaacaagaccgagaatcccctgacatccaaaatagacttgga
agcattgaccaccgctatcaggaactgctagagctcgccaaactccgcaaacagcggctt
ctggatgccctgtctctgtacaaactcttcaacgaggcagatggtgtggagacatggata
gatgaaaaggagaaattcttgactaccatgatcatcactgatgacattgaagagatagcc
atcatgaagcaccgctttgacagttttgagcatgagatgaatgccaccgcctccaaggtg
gccgttgtgaaccagctggctcgtcagttactgcagatagaacacccaggggcagccgag
gtcatcagtcgacagaaccagcttaatggaggttggaacaacttacgagatcttgttgac
cagaagagagaagagatcaatntatcccatggtcttcagaacttccatattgagtgcaat
gaaacaattagttggatccatgagaaagctaaggtcattgagtccactgatgagnctggt
aatgacctttctggagtcatgactcttcagagaagactcagtggaatggagagagatcta
gcagccattcaggccaaggtatcttgaatccctcaaggagaggcagagaaactccaagat
accaagcctgaggaagcccaggtcatcagagagaagattgccgagatcaacaatgtctgg
atggatctcaaggacatgctgagagagagagatgaaaaacttggagaggctggcgagttg
cagcgtttccttggaaatttggatcacttccagcaatggctgtcgcgtacccagaccacc
gtggcctcagaagacatccccaacagtctggccgatgccgagaagcttctgaaccagcac
cagcagctgaaggacgagatcgatgcctacgctccagagtacgccaagatgaaggagttt
ggagagaaggtcacagagggacaagaggaccctcagtacatgttcttgcgtcagagatta
caagctttggacagtggatgggaggagttacttcagatgtgggaaaaccgtcaacagcta
ctctctcagagtctaaatctacagatgtacttgagagatgccaaacaggccgaggtgttg
cttaaccaacaggagaacttcctatccaaggaggaagtgccgtcatctttgggacttctt
gataaacagaacacactggaagcagcagagaacttgatcaaagcccatgaggccttcata
accaccacggatgctaatgatgaaaagatcaacgctgtacttcagtttgctaaccgcctt
attgaggaccaacattatgctgctgacaaagttcacaagaaagcagagaacatcagtgag
agacgcgatgtgaaccgacagagagcctatgaacaacttgagcgtctgaaggaccaactg
ctcttgcaacagttcttgcaggaatgtgatgagcttcgagactggttacacgacaagatg
gcagcagcacaggatgaaacctaccgtgatgcgaagaacttgcacagcaagtatcttcgc
catcaggctttcgaaagagaanatgctgccaacaaagagcgtttgcagcgtctcatggag
tctggtgaaggattgatgcaggagaaaccagaatgcagagaacaaattgcacccatcctt
tcgagtttgcaagagcagtgggatgaactagaaggaaccaccaagtctaaggccgagcga
ttgttcgatgccaaccgcgccgtgatttatcagcagagctgtgatgacatcgacggatgg
atcgaacagctggagacacagattatcaccgctgaggagggggctagggatctgaccacg
gtcaacctgctcatgcagaaacaacatcaactggagtctcagatgaagatgaaggaagga
caggtggcagaactggatgagcaggcagtgatcctgaagaaggtggatccacagcaggaa
tccatgatcgaagcaaggaaggcccttgtggctgaaagattctccaagattcaagagcca
ctgattaaaaggcgagaacagttggagaaggtcaagaggatccaccagtttgtgagagac
gtggaggatgagaagatctggatcagtgagaagatgcccctcgctacttctaataatttc
ggaaatagtcttcttagtgtacaactgttgactaagaagaaccattcattacaaacggag
attgagaaccatgaacctagaatattcaatgtagtagaagtaggccagcagctgattgat
gagaagcacccacagtcggaggagttccaggccctcatagacgagctgatgaagatgtgg
gacgaccttcgacaggccatcgtacagcgcgacgagagactcaagctctccgacactgca
caacagtattattatgatgcctctgaggctgaagcctggatgagtgaacaagagctgtac
atgttaggagaagagagagcaaaggatgagatcggggcccagaacttcctgaagaaacac
caggctctggagaatgccgtggttgattatgcagatgttgtacgtcagttaggcgagagg
agtaggaatctaattgctgatgaacatccagaaagtgaccagattgcagtccggcaatct
caagtagacaaactgtacgctggtctgaaggatctgtctaatgagaggaagagcaagctg
gaagaagtgctcaaactatatgtactgaaccgagaaatcgatgacatcatgcagtggatc
gcagagaaagaaatagtagcaggatcacatgaacttggtgctgactttgagcatgtctgt
atgttacaagacaggttcagagagtttgctngtgagaccgagagcattggaacagagcga
gtgactgctgctaatgacaactgtgatgcccttataatggctgaccattctgattctgcc
cagattgcagagtggaaggataatctgaatgaggcttggaatgatttgttagagttaatg
gacaccagaacacaaatgcttcagtcttcctgggaattacacaaattctatcacgattgc
aaagacattctggaacgaatactggtaggatcttgaaaaaagaactatatcccagatgac
cttggtagagatgcacagagtgttgccgctcttcaaagaaaacacaacaacttcgagaac
gaccttgtcactcttggaaatcaagtgcaagccatacaggaggactccaaccgactgcag
accggttatgctggagacaagaagggcgagatccaggaccgggaggctgaggtggtcaac
gcctggaagaacctgaatctgatggtcaactcccggcgcatcaaactggctgacgcccac
gacctgttcaagttcttcaacatggtccgcgatctcattctctggatggatgacatcatt
agacaaatgaaaacacaagaaaaaccaagagatgtctctggggttgatttgctcatcaac
aaccaccaaagtatgaaagcagaaatagatgccagagaagaaaactttgccatttgtatt
aacttgggcaaagctttactggaaagaaatcactatagatctgatgaagtgagagagaaa
ctgatccagctgactacagagagacaggatatgaacgaccagtgggccgaccgctgggag
cacctgcagctcatcctagaaatctaccagtttgcccgggacgcttctgtggccgaggcc
tggttgatggctcaggaaccttacctacagaaccaagactttggggacacccttgatgca
gtagaaaacttgattaagaaacatgaagctttcgagaagtcagctgcaacacaagaggaa
agattttcagcattagaaaagttaacaacctttgaaattaaagaacaaaagaaacaaaca
gaagagcaaatggacattgcaaaagaaagagaagagaaacgcaggcaattaatagcggag
ttcttaccaccagagaaaccacctaccccagaaccagaggtagtggagtccatacaggtg
cctgtacaggaaacggcaccacaggcggaggcggtgcagcgagcatccgcggcgtccgag
gaaccacaaggagcgtctgaagacggatcacatacactacccaaaccaaaacgccgagat
gactcatccttagatgattcagcctttagcaccgagtcgagtgagcaggtctcggaaagt
tcgagtgcacctgagactcgggcagaccggcctaagcctaggccccgacctagtaaggag
gagtccccccctaccaagtcaaagacaccagagggtagggcaagtgacccctctcgaggt
aaaaaaccaatcagacaggagcagatgagtgagataacgagggaacccttacgcgggnct
gagatggctcgacttagtccctatgatttacccatgtctaccaaagacaagaaaagatct
cgttcactctctccctttcggaaactcttttctcgaaagagggacaggggccgtagcaaa
acagatgtcatagtccttgaagaattgccgtctacaagtgctgagtcaatccatcatgag
ggcaccctcactaggaaacacgactgggagcacgaaaacaaaaaggcatccaacagatca
tgggataaggtgtacgttgtactgaatggaaacttgttgtcttgttataaagacaagaaa
attgccaaacaggatcctaacaatttgattcaccatgaacagcccatcaacctgtcggga
gcccagtgtttccgggcaaccgactacaccaaacgcccccacgtgttccgactaaagctc
accaccagaggagaatatctgttccatgctaaggatgatggagaaatggacttgtggatt
cagaaggtgatttctgtgaccggagctgaaggcaccagtgttccctccaaatctatgaca
cttccagctcgcatggagggagagaaggagggaaagaaaaagaaaggcttccttacgatg
aagaagaaataa
DBGET
integrated database retrieval system
