Crassostrea virginica (eastern oyster): 111130590
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Entry
111130590 CDS
T09197
Name
(RefSeq) thyroid adenoma-associated protein homolog
KO
K24169
thyroid adenoma-associated protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
111130590
Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
111130590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2428
TPR_Trm732
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
111130590
NCBI-ProteinID:
XP_022333463
UniProt:
A0A8B8E160
LinkDB
All DBs
Position
4:complement(4535397..4557623)
Genome browser
AA seq
1826 aa
AA seq
DB search
MDLKGKKDLADLIQEQDWIQLYPAGNHCKIRQLFVDLIHYRSNDIHKLLRNLEEVLREWM
SLTQTNADVSTVHQFINVIIRLYCHCIENIKLARAIERFLGPLKIEHSGAIQVQLGQVFW
EIIENQHPSVQKLTAASCLLEQSEIVRDKAEQNISQVLSWTLQQLSEIRVAISTSGISKE
NLLTISAVVKVVLQLFQSCPSSTCAVAWSTEQRDRSSQQTVKQILLHLFQILNIETLTAD
VKMLSGTAIGIYLASAPTEHTSIRTFWTVFSNVFQGSISHVSSFDELITEGEIEEHSLLQ
LRLGAVAMVKGMLACASDKCLAFHSREYVPFCVELFTEVHEYCMGPISLRYHAFNLLQTW
FSKFLHLVSTDAVQCKNFIQSYLMKKTLDIVWLNWDSPVDDVSELATGSLKHLFEVWEVA
HKDQDRLSGKDPSPFYSSILLKLKSVAWYIKGQYRVMSALVPYVGSQFIISEYPTLPGDL
LKCMTTNYLASASADVYKTLVADIKDRSDRDRLTGAWEATWWSPLLSGLCSVHTLQRNNV
NQYWIPSTTRISQDLGVYIQNRLEKMLNTEKSADRAKLLFSYLSVSKVIRATQVCTLKGV
ELIKEGLSSYQDEIRSEAVGLVCVSQKKAEPLSEIEDMLLRDVLPLNLKVDSAPFRQHLV
AHLKRLLTRVRDGAIALTKTKDSSTLELSLQFIEWLHSVCMNNLVPGACYQRRKTCLEVL
AILYETFQYNEKAKQRKSFTPESTKRLNHHVKEKGLWDFFCYHSNTVLISCLLDGADDIQ
EVACSLLLEYFTWPLDGTPGPSGDGMDGSAECHLLSEALRLCNSPKPYQCQSGTLMCKLV
FSKCVVENGWQFSIQADHCTCNFNPTAGEGSPINAFLNVLLEEVKQMLVQSKSAPVQASK
SVSIHGYVTSITRCLTECPQLLHHDIFANLKQHYLCLIQLNIQIIQTMLGIMARGSESEG
CPSFAEIGQALESLIVENEEDYSQTEALSGEHQYLLSWCWVNIKESCLSLGHLSRVLISY
SVDTDTDVDVIQSVAGTFSRVLTQCRHRGVIEGCRTAFSIFCSALFESNSKHLNYIPQKI
LAESMEGLKAKAASTSTTRKSAGLPVIIQSIVSCERRNKKSELLRTTLDGLFSMAELPLE
KDVDDRHDLPQVHALNILKCLYGDSGLHEALMQFIGKAVILVVEQFGSPAWSVRNAATRL
FSVLITRLFGQKKIVGFQACNTKSLLELSAHYPELIPFLLQSLESALQREITAIDSLHPS
LFPVLTILSNMGRLDQESESSEALPLRSFVKSLIRSPVYFLRQLSSAAFVSLVPQIVTLE
TIEELVTELLKSKEANFIHGAMVSMEMLFNRCNEIPEGVVKNILDIQTTVALLPDIVTAQ
YVCLLHSIMRKENQKNEGNILEVVRSLCSSIRQNEQPMPKPLTQKACVDCLMQRQSYSIC
LDMLTKEEVDADVKLHVIETFTGLAEDGKIWEMFPQMLQCIQVESYPPLKSALVSCMTTL
YIKLQTLSISEMNLLKEIWQQNKTRIYDRGVWGSAVLEMGCVYMAASMSNDQFSAEDEDV
LLVCDAMHQISSNSDWCKQALQYGLMICGQGILRLCEQRKGKILLSAATKLFFCVWNLVQ
DDDCDVREYAAIFIAKLSQEFDQYASLQCNICLQEWINYFSDHFWWSVEIVNDVFLKLYQ
PHSVCQISKKLQLGKQLYEAEDNSFYSEAIFNSEYIYQMLQKMLSLRSTNGLPQALTQKE
VRGHDLMQDLHFIEEHLYQLDSAVINDLYEPANFKVVIQLLFKVRLLLQEKPACLNKENI
SQMHICYNNIITNKKIPWAVGVFLQE
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaaggaaaaaaggatttagcagatttgatacaggaacaggattggatacag
ctctatccagcagggaatcattgtaaaattcgacagctttttgtagatttgatccactat
agatcaaatgacattcacaaacttctacggaatctggaggaagtgctaagagagtggatg
tccttgacccagacaaatgcagacgtatccaccgtacaccagttcatcaatgtcatcatc
agactatactgtcattgcattgaaaacatcaagctggctagagccatagaaaggttttta
ggtccattgaaaatagaacacagtggagcaattcaggtgcagcttggacaagttttctgg
gaaatcattgaaaaccagcacccttctgtgcagaagcttactgctgcttcatgtcttcta
gaacagagtgaaattgttcgagataaagcagaacagaacatatctcaggttttgtcctgg
acccttcagcagctcagtgaaataagagttgccatttccacatcggggataagcaaggag
aacctgctcaccatctcagctgtggtaaaggttgtgctgcagctcttccagtcctgccca
tcatccacctgtgctgttgcttggagcacggaacagagagaccgctctagtcaacagact
gtaaaacaaattctgctccatttatttcagatattaaacattgagactcttacagcagat
gtgaagatgttgtctggaacagccattgggatatatctagcctccgctccaacagagcac
acatcaatccgtacattctggacagtatttagcaatgtattccaaggcagcatctcccat
gtctcctcctttgatgaattgataacagagggagaaatcgaggaacattcactgcttcaa
ctcagactaggtgccgttgccatggtaaaaggaatgttagcatgtgccagtgacaaatgt
ctagctttccactccagagaatatgtgccattttgtgttgagctttttacagaggtgcat
gagtactgcatggggccaatatctctccgttaccatgcctttaatttactccagacctgg
ttcagcaaattcctgcatttagtttccactgatgctgttcaatgtaaaaatttcattcag
tcgtacttaatgaaaaagactttagacattgtttggttaaactgggatagtcctgtggac
gatgtatcagagctggccactggatcgctgaagcatttgtttgaagtatgggaagtagcc
cacaaggaccaggacagattgagtggaaaagatccaagtcccttctactcttctatcctc
ctaaaactgaagagtgtggcctggtatataaagggccagtaccgagtaatgtcagcacta
gttccctatgtaggatcacagtttataatcagtgaatacccaacattgccaggagacttg
ctgaaatgtatgactacaaattatctggcctcggcttcagctgatgtttataagacttta
gtagctgacattaaggatagaagcgacagggacagactgactggtgcctgggaggccacc
tggtggtcccctctcctgtccggtctctgctctgtacacacgcttcagagaaacaatgtt
aatcaatactggataccctctaccacaaggatttcacaagaccttggtgtttacatccaa
aacagactggagaagatgctgaacactgagaaatctgctgacagagccaaattactgttt
tcgtatttatctgtctcaaaggtcatacgagcaacacaagtttgtacattaaagggagtt
gagttgatcaaggaaggattaagctcctatcaggatgaaattcgatctgaggctgtagga
ctggtgtgcgtttctcagaaaaaagcagaaccattgtcagagatagaagacatgcttctg
agagacgttttacctttgaatttgaaagtagactctgccccatttagacagcatttggtg
gctcatttgaagaggctcctgactcgagtgagggatggggccatagcactcacaaaaact
aaagactcgagcacacttgaactgtccctccagtttatagagtggctccattctgtgtgt
atgaataacttggttcctggtgcttgttatcagcgacgaaaaacatgtctggaggtcctc
gcaattctttatgagaccttccagtacaatgaaaaagccaagcaacgaaaatccttcacc
cctgaaagtaccaaaagattaaaccatcatgtcaaggaaaagggattgtgggatttcttc
tgttaccatagcaacacagtactgatctcatgtctgttggatggagctgatgacatacag
gaggtggcatgcagcttgctgttggagtattttacctggccactggatggcaccccaggg
ccctcaggggatggtatggacggtagcgctgagtgccaccttctctcagaagctctccgt
ctttgtaacagtcctaaaccttaccagtgccagagtgggaccctaatgtgtaaacttgtt
tttagcaaatgtgtggtagaaaatggatggcaattttctatacaggcagaccactgtact
tgtaactttaaccctactgcaggggaaggaagcccaataaatgcttttctcaatgttttg
cttgaagaggtgaaacaaatgttggtccagtccaaaagtgcacctgttcaagcttctaaa
tcagtgtctatccatggctatgtgacaagcataacaagatgtctaacggagtgcccacag
ttactgcaccatgacatctttgcaaaccttaaacagcattatctgtgcttgatccaactt
aacattcaaatcatccagacaatgctcggcattatggcccgaggctcggagtccgagggc
tgtccatcctttgctgagatagggcaagcactggagagtttgattgtggagaatgaggaa
gactacagtcagactgaggcgctgtccggggaacatcaatacctgctctcctggtgctgg
gtcaacattaaggagagttgtttgagcctgggacacttatcccgagtcctgatcagttac
tctgtagacacggataccgacgtggatgttattcagtccgtagcagggaccttttcgagg
gtcttgactcagtgcagacatagaggagttatagaaggatgtaggacagctttcagcatc
ttttgctcagctctgtttgaatcaaacagcaaacatttgaattatattccccagaagatc
ttagctgagtcaatggagggactcaaagcgaaagcagcctccacctctaccacaaggaaa
tcagctggtctgccagtgatcatacagagtattgtctcttgtgaacgcagaaacaaaaag
agtgagttattgaggaccactttggatggcttattcagcatggcagagcttccgttagag
aaagatgttgatgacagacatgatctcccgcaggttcatgctctgaacatcttgaaatgt
ttgtatggagactcgggcctacacgaagccctcatgcagttcatagggaaagctgtgatc
ctggtggtggagcagtttgggtcccctgcctggtccgttagaaatgcagcgaccagatta
tttagtgttctgataaccagactttttggacagaagaaaattgttggatttcaagcatgc
aacaccaaatcattgttagagttgtctgctcattatccagaattaatcccatttcttctc
caaagtctggagagtgctctacaaagggaaataactgcaattgattcactgcatccttcc
ttgtttcctgttctaactattctgtctaacatgggaagacttgatcaagagagtgaatca
agtgaggccttgccattgagaagttttgtgaagtcactcataaggagccctgtgtatttc
ctccgccagttgtcttctgctgcctttgtgtccttggttccacagatagtcaccttggaa
accattgaagaactggtgacggaattgctgaagtctaaagaggccaatttcatccatgga
gctatggtttccatggaaatgttgttcaacagatgcaatgaaataccagagggagttgtt
aagaatatactggatattcagactactgtagctctattaccagacattgtaacagcccag
tatgtttgcctgttacatagcattatgagaaaggagaaccaaaagaatgagggaaatata
ctggaggttgtaaggagtctctgttcaagcatacggcaaaatgaacaaccaatgcccaag
cccttgactcagaaagcttgtgtagactgcttaatgcaacgtcagtcatactccatttgt
ctggatatgcttactaaagaggaggtggatgctgatgtgaagttacatgtgattgaaacc
tttactgggctagccgaagatggcaaaatctgggaaatgtttccccagatgcttcagtgt
atacaagttgagagttatccccctttaaagagtgctcttgtgtcatgtatgactacacta
tatataaaattacaaactctcagcatatcagagatgaatctattgaaagagatctggcag
cagaacaaaacaagaatctatgaccgtggtgtatggggatcggctgtgttagagatgggg
tgtgtgtacatggctgctagtatgtcaaatgaccaattcagtgctgaggatgaagatgtc
cttttggtctgtgatgccatgcatcagatcagcagcaacagtgactggtgtaagcaggcc
ctccaatacggtctgatgatttgtgggcagggcattctgaggctgtgtgagcaaaggaaa
gggaaaatactcctgtcggctgccaccaaattgtttttctgtgtttggaaccttgtacaa
gatgatgattgtgatgtaagagaatatgctgccatttttattgctaagctttctcaggaa
tttgatcagtatgcatcattgcagtgcaatatttgtttacaggagtggatcaattacttt
agtgatcatttctggtggtccgtagaaattgtgaatgatgtctttctaaagctttatcaa
ccacacagtgtctgtcagatatctaagaaactgcagttaggtaaacagctgtatgaagca
gaagacaacagtttctattcagaggccatttttaattctgagtatatctatcaaatgttg
cagaaaatgctctctttgaggagcaccaatgggttgccacaagccctaacacaaaaggag
gtcagagggcacgacttgatgcaggatcttcactttattgaggaacacctttatcaactg
gattctgcagttatcaatgatttgtatgaacctgcgaacttcaaggttgtgattcagtta
ctgttcaaagtcagactgctgctacaagaaaagcctgcctgtctgaacaaggagaacatc
tctcagatgcatatttgttacaacaatatcataacaaataagaagataccatgggctgtt
ggggtcttcctgcaggagtga
DBGET
integrated database retrieval system
