Crassostrea virginica (eastern oyster): 111130592
Help
Entry
111130592 CDS
T09197
Name
(RefSeq) serum response factor-like
KO
K04378
serum response factor
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111130592
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
111130592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
FAS_meander
Motif
Other DBs
NCBI-GeneID:
111130592
NCBI-ProteinID:
XP_022333466
EnsemblRapid:
LOC111130592
UniProt:
A0A8B8E2H0
LinkDB
All DBs
Position
4:14961435..14969046
Genome browser
AA seq
431 aa
AA seq
DB search
MNGTHLNQPAFPTAPGGGVPFTMENVDPSTLEEDSDSDGDPSVATNPQGLKPGKKTKGRV
KIKMEFIENKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQP
MITSDSGKALIQTCLNSPDPPPGSQPQITMDQRMNPTGFEETELSYAVAEEEHGKVENPM
KQMFMPVSISEAGVINRSSPDNTSGTSSPSQQSTPSSQTNAQASPTSSASKTLAGMSNVN
LAIQGLPPGAVLVPQVGTAPLIPIQQQNGQQIGATSQPQTLYRIPNSNQILAFSSASGEA
SSQQTLVTSGASSENMTTLTNVSTAGLQAAQAGSQNAAAMTPGVVMYHTPQGIVYAPTTL
QDASRSMFNFQQTPTALSLPQSENGQQIITIPIPVSLAGNSQVPVYQFATQVTDTSQTTL
SQPTPAKKSKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacacatttgaaccagccggccttccccacagcccctgggggaggggttcca
tttactatggaaaatgtcgatccctcgactttggaagaagattcggactctgatggagac
ccgtctgtggccacaaatccccaggggcttaagcccgggaaaaagaccaagggacgagtc
aaaatcaaaatggaatttattgaaaataaattgagacggtatacaacttttagcaagcga
aaaacgggaattatgaaaaaggcttatgagctgtcaacactgactggtacacaagtgatg
ctgttagtggccagtgaaacaggacatgtgtatacttttgccaccagaaaactacaacct
atgatcacaagtgacagcggaaaagctctgattcaaacatgtctgaattccccggaccca
ccaccaggctctcagccacaaataaccatggaccagagaatgaatcccaccggattcgag
gaaacagagttgtcatatgcagtggccgaagaagaacatggaaaagtagagaaccccatg
aaacagatgtttatgcctgtttcgatctctgaggccggagtgatcaacaggagttccccg
gacaacaccagtggtacctcctccccctcccagcagtccacccccagcagtcagaccaac
gcccaggcctcccctacatcctctgcctcaaaaactctggcggggatgtccaatgtcaac
cttgccatccagggtctgccaccaggggcagtcttggttccacaagtgggaactgctcca
ttgatacctatccagcagcagaacggacaacagattggagccacctctcagccacagacc
ttgtatagaatccccaactccaaccagatactggccttctccagtgctagtggcgaagcc
tcatcccaacagacccttgtaacctcaggggccagttctgagaacatgaccactctgacc
aatgtgagcactgcaggtttacaggctgctcaagcaggttcccagaatgcagcagctatg
accccgggagtggtgatgtaccacacccctcaggggattgtgtatgcccccaccacacta
caggatgccagtcgctccatgttcaacttccagcagacccccaccgccctgtccctaccc
cagtccgagaacggtcagcagatcatcaccatccccatacctgtcagtctggcaggaaac
tcgcaggtccctgtttatcaatttgcaacccaagtaacagacacctctcaaacaacattg
tcccaacctacaccagctaaaaaatcaaaaaagtga
DBGET
integrated database retrieval system
